Return to main results Retrieve Phyre Job Id

Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank37Aligned Residues270
% Identity23%Templatec4fijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: catalytic domain of human pak4
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150.........160.........170.........180.........190.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  EHSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPL
Query Conservation            

 
 

 

             



 
               
   
  
 




   
        
Alig confidence 
























...


















..






























Template Conservation      
     

 
 

 

 
   ... 
   



 
        ..     
  

  
 




            
Template Sequence  PRSYLDNFIKIGEGSTGIVCIATVR. . . SSGKLVAVKKMDLRKQQRR. . ELLFNEVVIMRDYQHENVVEMYNSYLVGDEL
Template Known Secondary structure  GGGT
SSST...TT

STT
SSG..GG


TTB

TT
Template Predicted Secondary structure 





...





..










Template SS confidence 















































































   317..320.........330.........340. ........350.........360 .........370.........380.........390.
 
   196...200.........210.........220.........230.........240.........250. ........260.........270....
Predicted Secondary structure 




















.


















Query SS confidence 























































.






















Query Sequence  YVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSREGISYVM
Query Conservation   

 
    
 
                     
      
         
   

.          




        
Alig confidence 
















.





































.






















Template Conservation   

 
      
     .                   
   
     
  
   

         
 


          
Template Sequence  WVVMEFLEGGALTDIVT. HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP
Template Known Secondary structure 


TT.S


TT



SGGG
TT




TT


SS

Template Predicted Secondary structure 







.





































Template SS confidence 















































































   392.......400........ .410.........420.........430.........440.........450.........460.........470
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  DLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFVDFRFGDYVTK
Query Conservation             


          




 

 
 

 
 
  

       
   
    
               

 
Alig confidence 






































.







































Template Conservation              

          














.
  

           
              
     

 
Template Sequence  RRKLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD. GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD
Template Known Secondary structure 
B


S
GGG

TT

B
T.SS
TTTTS
SS



TTGGGS
Template Predicted Secondary structure 





















.



















Template SS confidence 















































































   471........480.........490.........500......... 510.........520.........530.........540.........
 
   355....360.........370.........380.........390....
Predicted Secondary structure 





















Query SS confidence 







































Query Sequence  HCWAENPADRVSMADVLRYLQTTFGMKPVVLSILSSNRST
Query Conservation   
   

  


  

   
                    
Alig confidence 


















..


















Template Conservation    
  

  
 
  


 
..
                  
Template Sequence  RLLVRDPAQRATAAELLKH. . PFLAKAGPPASIVPLMRQN
Template Known Secondary structure  S
SSTTTS

TT
..GGGGG


GGGGGGGSTTT
Template Predicted Secondary structure 








..








Template SS confidence 







































   551........560......... 570.........580........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D