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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank171Aligned Residues250
% Identity22%Templatec4dc2A_
PDB info PDB header:transferase/transferase substrateChain: A: PDB Molecule:protein kinase c iota type; PDBTitle: structure of pkc in complex with a substrate peptide from par-3
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170....... ..180.........190...
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Query Sequence  IEHSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNL. DHPNVVKFYGVGASQE
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLK. . . KTDRIYAMRVVKKELVN. . . IDWVQTEKHVFEQASNHPFLVGLHSCFQTES
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GGG
SST...TTTGGGT
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   239240.........250.........260.... .....270.........280. ........290.........300.........310..
 
   194.....200.........210.........220.........230.........240.........250. ........260........ .270.
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Query Sequence  PLYVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSRE. GIS
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Template Sequence  RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP
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TT
BSS

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GGG
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T
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   317..320.........330.........340.........350.........360.........370.........380.........390......
 
   272.......280.........290.........300.........310.........320.... .....330.........340.........
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Query Sequence  YVMDLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRV. . ADVVGKVRNGYRMRFDPVFVDFRFG
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Template Sequence  GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDIVGSNTEDYLFQVILEKQIRIPRSLSVK. . A
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   397..400.........410.........420.........430........ .440.........450.........460.........470.. .
 
   350.........360..... ....370...
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Query Sequence  DYVTKHCWAENPADRV. . . . . . SMADVLRY
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Template Sequence  ASVLKSFLNKDPKERLGCHPQTGFADIQGH
Template Known Secondary structure  T
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TTTSTT
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   480.........490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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