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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank259Aligned Residues251
% Identity21%Templatec4b99A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 7; PDBTitle: crystal structure of mapk7 (erk5) with inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  HSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQ. . . .
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Template Sequence  GDEYEIIETIGNGAYGVVSSARRR. . . LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG
Template Known Secondary structure 
SS
SS
T...TT

TTTTSS


TTB




SS
TT
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   52.......60.........70..... ....80.........90.........100.........110.........120........
 
   193......200.........210.........220.........230.........240.........250. ........260.........
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Query Sequence  . . EPLYVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSREG
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Template Sequence  EFKSVYVVLDLMESDLHQIIHSSQ. PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL
Template Known Secondary structure  T




STSSS.


TT
B




GGG
TT




TT
B

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   129130.........140.........150.. .......160.........170.........180.........190.........200.......
 
   270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  ISYVMDLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFV. . . . .
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Template Sequence  QY. FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA. RRQLFPGKNYVHQLQLIMMVLGTPSPAVIQRVRAY
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SS



TT

TT
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T.TS
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   215. ...220.........230.........240.........250....... ..260.........270.........280.........290..
 
   345....350.........360.........370...
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Query Sequence  . . . . . . . . . . . . . . . . . . DFRFGDYVTKHCWAENPADRVSMADVLRY
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Template Sequence  IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH
Template Known Secondary structure  SS






STT

S
SSTTTS

TTS
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   298.300.........310.........320.........330.........340....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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