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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank38Aligned Residues251
% Identity21%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  HSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLY
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Template Sequence  TEEYQLFEELGKGSVVRRCVKV. . . . . LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY
Template Known Secondary structure 

T.....TTTS
S


BTTB


SS
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   10.........20.........30. ........40.........50.........60.........70.........80....
 
   197..200.........210.........220.........230.........240.........250....... ..260.........270 .
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Query Sequence  VIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNCLYGGGQ. . . . VKIADFGLSREGI. S
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Template Sequence  LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE
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B

B
S


TT
B



SSTTSBSSTT




SS
B


TT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   272.......280.........290.........300.........310.........320.........330....... ..340.........350
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Query Sequence  YVMDLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRM. RFDPVFVDFRFGD
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Template Sequence  QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK
Template Known Secondary structure 

B


S
S
GGG

TT

B
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S


SST




TTTTTTS
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   167..170.........180.........190.........200........ .210.........220.........230.........240.....
 
   351........360.........370...
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Query Sequence  YVTKHCWAENPADRVSMADVLRY
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Template Sequence  DLINKMLTINPSKRITAAEALKH
Template Known Secondary structure  S
SSTTTS

S
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   246...250.........260........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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