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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank221Aligned Residues250
% Identity24%Templatec3rp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase; PDBTitle: crystal structure of the apo mapk from toxoplasma gondii, 25.m01780 or2 tgme49_007820
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  LKQPWEIEHSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGV
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Template Sequence  PHSDWQI. PDRYEIRHLHVCEAYDKLRV. . . . . . . . . . . . VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI
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Query Sequence  G. . . . . ASQEPLYVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIAD
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Template Sequence  VIPKDVEKFDELYVVLEIADSDFKK. LFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCD
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   121........130.........140..... ....150.........160.........170.........180.........190.........
 
   263......270.........280 ......... 290.........300.........310.........320...
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Query Sequence  FGLSREGISYVMDLTKKV. PIRWLAPET. LKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMR. . . . . . . . . . . . . . . . .
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Template Sequence  FGLARTVDYPENGNSQLPVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN. MIKENVAYHADRGPLFPTRGNRDQLN
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   200.........210.........220.........230.........240.........250.. .......260.........270........
 
   324.....330.........340..... ....350.........360.........370...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . VADVVGKVRNGYRMRFDPVFVD. FRFGDYVTKHCWAENPADRVSMADVLRY
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Template Sequence  VIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH
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   326...330.........340.........350.........360.........370.........380.........390.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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