Job Description Q9TXI2 Confidence 100.00% Date Sat Apr 13 13:08:07 BST 2013 Rank 25 Aligned Residues 241 % Identity 25% Template c3qa8A_ PDB info PDB header:immune system, signaling protein Chain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta Resolution 3.60 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		E	L	T	K	K	L	G	E	G	A	F	G	E	V	W	K	G	K	L	T	L	K	N	G	N	V	E	N	C	A	I	K	T	A	K	L	E	S	L	N	K	E	Q	I	K	E	I	M	R	E	A	R	L	M	R	N	L	D	H	P	N	V	V	K	F	Y	G	V	G	A	S	Q	E	P	L	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																						.	.	.															.																																						.	.	.	.	.
Template Conservation																						.	.	.															.
Template Sequence		E	M	K	E	R	L	G	T	G	G	F	G	Y	V	L	R	W	I	H	Q	.	.	.	D	T	G	E	Q	V	A	I	K	Q	C	R	Q	E	.	L	S	P	K	N	R	E	R	W	C	L	E	I	Q	I	M	K	K	L	N	H	P	N	V	V	S	A	R	E	V	P	D	G	L	Q	K	L	A	P	N	D	L
Template Known Secondary structure									B		S	S	S	B							T	.	.	.	T	T	T										S		.																					B	T	T	B								T	T	T					T	T	S	S
Template Predicted Secondary structure																						.	.	.															.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
			196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.																						.	.	.																																										.	.	.	.
Query SS confidence		.																						.	.	.																																										.	.	.	.
Query Sequence		.	Y	V	I	M	E	L	A	D	C	G	A	L	D	S	Y	L	Q	K	N	P	N	.	.	.	L	V	P	D	K	K	M	E	M	I	Y	Q	A	A	C	G	I	S	Y	M	H	E	K	K	L	L	H	R	D	I	A	A	R	N	C	L	Y	G	G	G	Q	.	.	.	.	V	K	I	A	D	F	G	L	S	R
Query Conservation		.																						.	.	.																																										.	.	.	.
Alig confidence		.																						.	.	.																																										.	.	.	.
Template Conservation
Template Sequence		P	L	L	A	M	E	Y	C	E	G	G	D	L	R	K	Y	L	N	Q	F	E	N	C	C	G	L	K	E	G	P	I	R	T	L	L	S	D	I	S	S	A	L	R	Y	L	H	E	N	R	I	I	H	R	D	L	K	P	E	N	I	V	L	Q	P	G	P	Q	R	L	I	H	K	I	I	D	L	G	Y	A	K
Template Known Secondary structure										S	S		B							S	S	S		T	T				S	S																			T	T	B							S	T	T							S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.														.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	I	S	Y	V	M	D	L	T	K	K	V	P	I	R	W	L	A	P	E	T	L	K	A	G	I	Y	S	P	K	T	D	V	F	A	F	G	I	M	A	W	E	I	T	E	N	G	K	E	P	Y	P	D	M	R	V	A	D	V	V	G	K	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		E	L	D	Q	G	E	L	C	T	E	F	V	G	T	L	Q	Y	L	A	P	E	L	L	E	Q	K	K	Y	T	V	T	V	D	Y	W	S	F	G	T	L	A	F	E	C	I	T	.	G	F	R	P	F	L	P	N	W	Q	P	V	Q	W	H	G	K	V	R	I	V	V	Y	D	D	L	T	G	A	V	K	F	S
Template Known Secondary structure		B	T	T	S									S			T	T		S	S		S	S			S			S	T	T															S	.	S		S	S			S	S						S	S	T	T					S					S	S	S
Template Predicted Secondary structure																																																.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		335	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		Y	R	M	R	F	D	P	V	F	V	D	.	.	F	R	F	G	D	Y	V	T	K	H	C	W	A	E	N	P	A	D	R	V	S
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		S	V	L	P	T	P	N	H	L	S	G	I	L	A	G	K	L	E	R	W	L	Q	C	M	L	M	W	H	Q	R	T	D	P	Q
Template Known Secondary structure		S	S	S			S					G	G	G												S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D