Job Description Q9TXI2 Confidence 99.25% Date Sat Apr 13 13:08:07 BST 2013 Rank 409 Aligned Residues 79 % Identity 13% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70								.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																													.	.	.	.	.	.	.
Query SS confidence																					.	.																																													.	.	.	.	.	.	.
Query Sequence		S	E	H	W	Y	H	G	L	L	P	R	E	D	I	K	A	M	L	R	.	.	K	N	G	D	F	L	V	R	S	T	E	P	K	A	G	E	P	R	Q	Y	V	L	S	A	M	Q	S	E	E	L	E	D	A	G	V	K	H	Y	V	M	R	L	N	S	.	.	.	.	.	.	.	S	N	Q	I	F	L	E	A
Query Conservation																					.	.																																													.	.	.	.	.	.	.
Alig confidence								.													.	.																	.	.	.									.	.	.	.														.	.	.	.	.	.	.
Template Conservation								.																															.	.	.									.	.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	.	.	.	L	A	I	T	W	K	L	D	.	.	.	.	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G
Template Known Secondary structure				T	T			.												T	T	S		T	T								S	S		T	T		.	.	.									.	.	.	.	T	T											S		S	S	T	T	S			S					T	T
Template Predicted Secondary structure								.																															.	.	.									.	.	.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	F	E	T	I	A	S	L	V	N	Y	Y	M	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N
Template Known Secondary structure					S	S								T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D