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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank181Aligned Residues237
% Identity22%Templatec3i6uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLYV
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Template Sequence  DEYIMSKTLGSGACGEVKLAFER. . . KTCKKVAIRIISKRKFAIG. . LNVETEIEILKKLNHPCIIKIKNFFDAEDY. YI
Template Known Secondary structure  TT
SSST...TT

GGGGTT
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   218.220.........230.........240 .........250......... 260.........270.........280......... 290.
 
   198.200.........210.........220.........230.........240.........250... ......260.........270...
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Query Sequence  IMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNCLY. . . . GGGQVKIADFGLSREGISYV
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Template Sequence  VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGP. .
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BGGGGTSSS



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   300.........310.........320.........330.........340.........350.........360.........370.......
 
   274.....280.........290.........300.........310.........320... ......330.........340..... ....350.
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Query Sequence  MDLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMR. VADVVGKVRNGYRMRFDPVFVD. FRFGDY
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Template Sequence  . . . . . . . . . . TYLAPEVLVAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD
Template Known Secondary structure  ..........TT

TTTT

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   389390.........400.........410........ .420.........430.........440.........450.......
 
   352.......360.........370...
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Query Sequence  VTKHCWAENPADRVSMADVLRY
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Template Sequence  LVKKLLVVDPKARFTTEEALRH
Template Known Secondary structure  S
SSTTTS

S
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   462.......470.........480...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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