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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank202Aligned Residues252
% Identity23%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLYV
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Template Sequence  KKYHLKGAIGQGSYGVVRVAIEN. . . QTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL
Template Known Secondary structure 
SS
T...TT






TTB


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   8.10.........20.........30 .........40.........50.........60.........70.........80....
 
   198.200.........210...... ...220.........230.........
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Query Sequence  IMELADCGALDSYLQKNPN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LVPDKKMEMIYQAACGISYMHEK
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Template Sequence  VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQ
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BTTTT





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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   240.........250.........260.........270.........280.........290.... .....300.........310.......
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Query Sequence  KLLHRDIAARNCLYGGGQVKIADFGLSREGISYVMDLTKKVPIRWLAPETLKAGI. . YSPKTDVFAFGIMAWEITENGKE
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Template Sequence  GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM. GAV
Template Known Secondary structure  T




GGGS
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TT
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GGG

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   170.........180.........190.........200.........210.........220.........230.........240..... ...
 
   318.320.........330.........340..... ....350.........360.........370...
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Query Sequence  PYPDMRVADVVGKVRNGYRMRFDPVFVD. FRFGDYVTKHCWAENPADRVSMADVLRY
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Template Sequence  PFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH
Template Known Secondary structure  SS

SS



TTSGGGGGS
S
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   257..260.........270.........280.........290.........300.........310...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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