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Job DescriptionQ9TXI2
Confidence87.30%DateSat Apr 13 13:08:07 BST 2013
Rank446Aligned Residues127
% Identity16%Templatec3csvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170.........180.........190.........200.........210........
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Query Sequence  LTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLYVIMELADCGALDSYLQKNPNLV
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Template Sequence  QRLRSPTGAKAVLXD. . WSPEEGGDTQPFVDLAQYLRNLDIS. APEIYAEEHARG. . LLLIEDLGDALFTEVINNDPAQE
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TT

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STT
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B
GGG
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   35....40......... 50.........60.........70.... .....80...... ...90.........100.........
 
   219220........ .230.........240......
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Query Sequence  PDKKMEMIYQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AACGISYMHEKKLLHRDI
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Template Sequence  XPLYRAAVDLLIHLHDAQTPELARLDPETLSEXTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEGDXVFVHRDF
Template Known Secondary structure  TS





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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   247..250....... ..260.........270
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Query Sequence  AARNCLYGGGQ. . . . . VKIADFGLSREGI
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Template Sequence  HAQNLLWLPEREGLARVGVIDFQDAKLGH
Template Known Secondary structure  SGGG
TTS
GGGG


TT

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   190.........200.........210........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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