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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank213Aligned Residues217
% Identity23%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150......... 160.........170.........180.........190......
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Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESL. NKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLY
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Template Sequence  EDFKVGNLLGKGSFAGVYRAESI. . . HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY
Template Known Secondary structure  GG
SST...TT

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   910.........20.........30. ........40.........50.........60.........70.........80.....
 
   197..200.........210.... .....220.........230.........240.........250. ........260.........270....
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Query Sequence  VIMELADCGALDSYLQKN. PNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSREGISYVM
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Template Sequence  LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . .
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   86...90.........100.........110.........120.........130.........140.........150.........
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  DLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFVDFRFGDYVTK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . LKLESDVWSLGCMFYTLLI. GRPPFNTLNK. . . . . . . VVLADYEMPSFLSIE. . AKDLIH
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   160.........170........ .180........ .190.........200... ......
 
   355....360.........370...
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Query Sequence  HCWAENPADRVSMADVLRY
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Template Sequence  QLLRRNPADRLSLSSVLDH
Template Known Secondary structure  S
SSGGGS

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   243......250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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