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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank133Aligned Residues256
% Identity23%Templatec2vd5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150........ .160.........170.........180.........
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Query Sequence  QPWEIEHSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLES. LNKEQIKEIMREARLMRNLDHPNVVKFYGVG
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Template Sequence  KEVRLQRDDFEILKVIGRGAFSEVAVVKMK. . . QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF
Template Known Secondary structure  S

GGG
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   62.......70.........80.........90. ........100.........110.........120.........130........
 
   190.........200.........210.. .......220.........230.........240.........250. ........260.......
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Query Sequence  ASQEPLYVIMELADCGALDSYLQ. KNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSR
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Template Sequence  QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL
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   139140.........150.........160.........170.........180.........190.........200.........210........
 
   268.270.. .......280.........290 .........300.........310.........320.........330........
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Query Sequence  EGISY. . VMDLTKKVPIRWLAPETL. . . . . . . KAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMR
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Template Sequence  KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY. GQTPFYADSTAETYGKIVHYKEHL
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TTS

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   219220.........230.........240.........250.........260.........270... ......280.........290.......
 
   339340.........350.........360.... .....370...
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Query Sequence  FDPVFVDFRFGDYVTKHCWAENPADR. . . VSMADVLRY
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Template Sequence  SLPGVPEE. . ARDFIQRLLC. PPETRLGRGGAGDFRTH
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   298.300..... ....310..... ....320.........330..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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