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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank236Aligned Residues258
% Identity25%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLYV
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Template Sequence  NNFDHKFLIGHGVFGKVYKGVLR. . . . DGAKVALKRRTPE. . SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL
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S



S
B
SSS
T....T



S
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SSGGGS


TTB




TT

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   3940.........50.........60. ........70.... .....80.........90.........100.........110..
 
   198.200.........210...... ...220.........230.........240.........250. ........260.........270..
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Query Sequence  IMELADCGALDSYLQKNPN. . . . LVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSREGISY
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Template Sequence  IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL
Template Known Secondary structure 

TT
BTGGGSSSS


S



TT
S


STT
TT




TT

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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   273......280 .........290.........300.........310.........320.........330... ..
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Query Sequence  VMDLTKKV. PIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRN. . . . . . . . . . . . . . . . GY
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Template Sequence  DQTHLVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL
Template Known Secondary structure  S






S
TTT





T.

TT
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   193......200.........210.........220.........230.... .....240.........250.........260.........270.
 
   336...340.........350.........360.........370.........380....
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Query Sequence  RMRFDPVFVDFRFGDYVTKHCWAENPADRVSMADVLRYLQTTFGMKPVV
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Template Sequence  ADKIRPESLRK. . FGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV
Template Known Secondary structure  TT
S
..T
SSGGGS

SS


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   274.....280.... .....290.........300.........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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