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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank161Aligned Residues249
% Identity22%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150......... 160.........170....... ..180.........190.....
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Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESL. NKEQIKEIMREARLMRNL. DHPNVVKFYGVGASQEPL
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERK. . . GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL
Template Known Secondary structure  TTTTT...TSS
T
T
TT

TTB

TT
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   340.........350.........360.. .......370.........380.........390.........400.........410......
 
   196...200.........210.........220.........230.........240.........250. ........260.........270....
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Query Sequence  YVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSREGISYVM
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Template Sequence  YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV
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S
BTTSS

TT
B



SGGG
TTS



TT
B
S

TT
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   417..420.........430.........440.........450.........460.........470.........480.........490......
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  DLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFVDFRFGDYVTK
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Template Sequence  TTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAYPKSMSKE. . AVAICK
Template Known Secondary structure 
B


S
TTT

TT

B
T.SS
SS

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   497..500.........510.........520.........530..... ....540.........550..... ....560...... ...570..
 
   355....360...... ...370...
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Query Sequence  HCWAENPADRVS. . . . . MADVLRY
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Template Sequence  GLMTKHPGKRLGCGPEGERDIKEH
Template Known Secondary structure  SS
SSGGGSTT
STTTS
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   574.....580.........590.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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