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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank101Aligned Residues248
% Identity25%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLYV
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNR. . . VTEEAVAVKIVDMKRCP. . . . ENIKKEICINKMLNHENVVKFYGHRREGNIQYL
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S



SST...TT

TT


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TTB


STT
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   7..10.........20......... 30.........40...... ...50.........60.........70.........
 
   198.200.........210.........220.........230.........240.........250. ........260...... ...270...
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Query Sequence  IMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLS. . . REGISYV
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Template Sequence  FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER
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TTGGGGSBTTTB

TT
S

SGGG
TT




TT

TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   274.....280.........290..... ....300.........310.........320.........330.........340.........350..
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Query Sequence  MDLTKKVPIRWLAPETLKAGIY. SPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFVDFRFGDYV
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Template Sequence  LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL
Template Known Secondary structure 
B
S

S
GGGS

SSB
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S
SS

TT
TT
TTSTTGGGT
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   163......170.........180.........190.........200... ......210.........220.........230.........240.
 
   353......360.........370...
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Query Sequence  TKHCWAENPADRVSMADVLRY
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Template Sequence  LHKILVENPSARITIPDIKKD
Template Known Secondary structure  S
SSTTTS

TT
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   242.......250.........260..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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