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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank80Aligned Residues240
% Identity28%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160... ......170.........180.........190
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Query Sequence  PWEIEHSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQ. IKEIMREARLMRNLDHPNVVKFYGVGA
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREK. . . QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH
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G..GG
SST...TT

TT
TT


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   127..130 .........140.........150... ......160.........170.........180.........190.........200.
 
   191........200.........210.........220.........230.........240.........250. ........260.........
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Query Sequence  SQEPLYVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSREG
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Template Sequence  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . .
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   202.......210.........220.........230.........240.........250.........260.........270........
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  ISYVMDLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFVDFRFG
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Template Sequence  . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEG. . A
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GGG

GGGTTTTSSGGG.SS
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   279280.........290.........300.........310.. .......320.........330.. .......340... .
 
   350.........360.........370...
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Query Sequence  DYVTKHCWAENPADRVSMADVLRY
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Template Sequence  RDLISRLLKHNPSQRPMLREVLEH
Template Known Secondary structure  S
SSGGGS

T
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   357..360.........370.........380
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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