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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank230Aligned Residues247
% Identity17%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120..... ....130.........140.........150.........160.........170....... ..180.........190....
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Query Sequence  HSQVELTKK. LGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNL. DHPNVVKFYGVGASQEP
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Template Sequence  EDVYQLQEDVLGEGAHARVQTCINL. . . ITSQEYAVKIIEKQPGHIR. . SRVFREVEMLYQCQGHRNVLELIEFFEEEDR
Template Known Secondary structure  GGS
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   80.........90.........100.... .....110.........120... ......130.........140.........150....
 
   195....200.........210.........220.........230.........240.........250.........260.........270....
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Query Sequence  LYVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNCLYGGGQVKIADFGLSREGISYVM
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Template Sequence  FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH. . . . PNQVSPVKICDFGPC
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   155....160.........170.........180.........190.........200.........210..... ....220.........230
 
   275....280.........290.........300.........310.........320... ......330.........340...
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Query Sequence  DLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMR. . . . . . . . . . . VADVVGKVRNGYRMRFDPVF
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Template Sequence  GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDW
Template Known Secondary structure  SSGGG

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   252.......260.........270.........280.........290 .........300.........310.........320.........330
 
   344. ....350.........360.........370...
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Query Sequence  VD. FRFGDYVTKHCWAENPADRVSMADVLRY
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Template Sequence  AHISCAAKDLISKLLVRDAKQRLSAAQVLQH
Template Known Secondary structure  TTS
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TTTS

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   335....340.........350.........360.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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