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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank239Aligned Residues257
% Identity16%Templatec1vzoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150....... ..160.........170.... .....180.........190
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Query Sequence  EIEHSQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLE. . SLNKEQIKEIMREARLM. RNLDHPNVVKFYGVGA
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Template Sequence  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ
Template Known Secondary structure 


GGGTTT
SSTTTT
SSSGGG


T
TTB

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   43......50.........60.........70.........80.........90.........100.........110.........120..
 
   191........200.........210.........220.........230.........240.........250. ........260.........
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Query Sequence  SQEPLYVIMELADCGALDSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNC. LYGGGQVKIADFGLSREG
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Template Sequence  TETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF
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S
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TT






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   123......130.........140.........150.........160.........170.........180.........190.........200..
 
   270.........280 .........290.........300.........310.........320.........330.... .....340.....
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Query Sequence  ISYVMDLTKKV. PIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNG. . . YRMRFDPVFVD
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Template Sequence  VADETERAYDFCGTIEYMAPDIVRGGDDKAVDWWSLGVLMYELLT. GASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA
Template Known Secondary structure 
GGGGGGG
GGGS

TT

TT


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TTS
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   203......210.........220.........230.........240....... ..250.........260.........270.........280.
 
   346...350.........360..... ....370...
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Query Sequence  FRFGDYVTKHCWAENPADRV. . . . . SMADVLRY
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Template Sequence  L. . AKDLIQRLLMKDPKKRLGCGPRDADEIKEH
Template Known Secondary structure  ..T
SSGGGSTTSSTTTTS
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   285 ....290.........300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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