Return to main results Retrieve Phyre Job Id

Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank82Aligned Residues293
% Identity18%Templatec1kobB_
PDB info PDB header:kinaseChain: B: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (aplysia), autoregulated protein2 kinase domain
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLYV
Query Conservation          

 
 

 

             



 
               
   
  
 




   
         
Alig confidence 






















...













..





































Template Conservation    
     

 
 

 

 
   ...     



 
   ..          

  
  
 




             
Template Sequence  DYYDILEELGSGAFGVVHRCVEK. . . ATGRVFVAKFINTP. . YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL
Template Known Secondary structure  GTTTT...TT



..STT

STTB


SS
Template Predicted Secondary structure 





...





..
















Template SS confidence 















































































   51........60.........70... ......80....... ..90.........100.........110.........120.....
 
   198.200.........210..... ....220.........230.........240.........250.... .....260.........270...
Predicted Secondary structure 












.










...















Query SS confidence 

















.






































. . .


















Query Sequence  IMELADCGALDSYLQKNP. NLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNCLYG. . . GGQVKIADFGLSREGISYV
Query Conservation 
 
    
 
        .             
      
         
   

   ...       




       
Alig confidence 

















.






































...


















Template Conservation 
 
    
 
                                                          
 
 
       
Template Sequence  ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE
Template Known Secondary structure 




BTT
TT



TTT




GGGSSTT
S



TT


TTS
Template Predicted Secondary structure 






















































Template SS confidence 















































































   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   274.....280.........290.........300.........310.........320.........330.........340..... ....350..
Predicted Secondary structure 






































.
Query SS confidence 







































































.






Query Sequence  MDLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFVD. FRFGDYV
Query Conservation              


          




 

 
 

 
 
  

       
   
    
         .      
Alig confidence 







































.






























.






Template Conservation                            





 






.
  

           
               
     
Template Sequence  IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS. GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF
Template Known Secondary structure 
TTGGG

TT

B
.S

TT

SST




TTTTTTS
Template Predicted Secondary structure 




























.



















Template SS confidence 















































































   206...210.........220.........230.........240..... ....250.........260.........270.........280....
 
   353......360.........370... ......380.........390.........400.........410......
Predicted Secondary structure 






..






























Query SS confidence 




















. .










































Query Sequence  TKHCWAENPADRVSMADVLRY. . LQTTFGMKPVVLSILSSNRSTEEEMKTMKPPMFSVKRNNKKKP
Query Conservation 
  
   

  


  

   ..
                                         
Alig confidence 




















..










































Template Conservation 
   
  

  
 
  


 

                                            
Template Sequence  IKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIAN
Template Known Secondary structure  TTS
SSGGGS

TTSS

TT





GGGGTTTS


SSGGGGGGG
Template Predicted Secondary structure 


































Template SS confidence 

































































   285....290.........300.........310.........320.........330.........340.........350
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D