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Job DescriptionQ9TXI2
Confidence100.00%DateSat Apr 13 13:08:07 BST 2013
Rank28Aligned Residues250
% Identity20%Templatec1koaA_
PDB info PDB header:kinaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (c.elegans), autoregulated protein2 kinase and immunoglobulin domains
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  SQVELTKKLGEGAFGEVWKGKLTLKNGNVENCAIKTAKLESLNKEQIKEIMREARLMRNLDHPNVVKFYGVGASQEPLYV
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Template Sequence  DHYDIHEELGTGAFGVVHRVTER. . . ATGNNFAAKFVMTP. . HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM
Template Known Secondary structure  GTTTT...TTT


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TTB

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   5940.........5950.........5960.. .......5970...... ...5980.........5990.........6000.........6010....
 
   198.200....... ..210.........220.........230.........240.........250..... ....260.........270...
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Query Sequence  IMELADCGAL. DSYLQKNPNLVPDKKMEMIYQAACGISYMHEKKLLHRDIAARNCLYGG. . . GQVKIADFGLSREGISYV
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Template Sequence  IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ
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   6015....6020.........6030.........6040.........6050.........6060.........6070.........6080.........6090....
 
   274.....280.........290.........300.........310.........320.........330.........340..... ....350..
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Query Sequence  MDLTKKVPIRWLAPETLKAGIYSPKTDVFAFGIMAWEITENGKEPYPDMRVADVVGKVRNGYRMRFDPVFVD. FRFGDYV
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Template Sequence  SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF
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   6095....6100.........6110.........6120.........6130.... .....6140.........6150.........6160.........6170...
 
   353......360.........370...
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Query Sequence  TKHCWAENPADRVSMADVLRY
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Template Sequence  IRKLLLADPNTRMTIHQALEH
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   6174.....6180.........6190....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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