Job Description P0A084 Confidence 8.42% Date Tue Jul 17 17:05:04 BST 2012 Rank 88 Aligned Residues 73 % Identity 12% Template d1whwa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	F	S	Y	N	K	L	L	E	I	F	F	S	V	I	D	P	L	D	T	G	G	Q	Y	Q	D	R	G	P	Q	Y	Q	T	A	I	F	Y	T	N	D	H	Q	K	E	L	A	E	T	Y	I	E	Q	L	K	N	T	I	N	A	D	K	A	I	A	T	K	I	L	P	A	S	Q
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		S	Y	T	S	S	E	E	D	L	E	K	.	L	F	S	A	Y	G	P	L	S	E	L	H	Y	P	I	D	S	L	T	K	K	P	K	G	F	A	F	V	T	F	M	F	P	E	H	A	V	K	A	Y	A	E	V	D	G	Q	V	F	Q	G	R	M	L	H	V	L	P	S	T	I	K	K
Template Known Secondary structure			T	T									.				T	T	S											T	T	T					S							S	S											T	T	T			S	S	S												S
Template Predicted Secondary structure													.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions