Job Description P0A084 Confidence 7.49% Date Tue Jul 17 17:05:04 BST 2012 Rank 93 Aligned Residues 71 % Identity 10% Template c2d9pA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:polyadenylate-binding protein 3; PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3 Resolution UNK

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	F	S	Y	N	K	L	L	E	I	F	F	S	V	I	D	P	L	D	T	G	G	Q	Y	Q	D	R	G	P	Q	Y	Q	T	A	I	F	Y	T	N	D	H	Q	K	E	L	A	E	T	Y	I	E	Q	L	K	N	T	I	N	A	D	K	A	I	A	T	K	I	L	P	A	S	Q
Query Conservation
Alig confidence																																													.	.	.
Template Conservation																																													.	.	.
Template Sequence		D	D	G	I	D	D	E	R	L	R	K	A	F	S	P	F	G	T	I	T	S	A	K	V	M	M	E	G	G	R	S	K	G	F	G	F	V	C	F	S	S	P	E	.	.	.	E	A	T	K	A	V	T	E	M	N	G	R	I	V	A	T	K	P	L	Y	V	A	L	A	Q	R	K	E
Template Known Secondary structure			T	T									T	T	T	T	T	S											S	S	S										S	S			.	.	.										T	T		B	S	S	S	S	B							S	S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions