Job Description P0A086 Confidence 39.06% Date Tue Jul 17 17:05:04 BST 2012 Rank 50 Aligned Residues 78 % Identity 14% Template d1h2vz_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.0

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	V	T	S	F	E	N	I	L	D	I	Y	F	K	T	F	D	P	T	D	D	Q	G	Q	F	F	D	R	G	E	S	Y	Q	P	V	I	F	Y	H	D	E	H	Q	K	K	A	A	E	F	K	K	Q	Q	L	N	E	Q	G	I	F	K	K	P	V	I	T	P	I	K	P	Y	K	N	F	Y	P	A	E	D
Query Conservation
Alig confidence															.																																																				.	.
Template Conservation															.																																																				.	.
Template Sequence		S	F	Y	T	T	E	E	Q	I	Y	E	L	F	.	S	K	S	G	D	I	K	K	I	I	M	G	L	D	K	M	K	K	T	A	C	G	F	C	F	V	E	Y	Y	S	R	A	D	A	E	N	A	M	R	Y	I	N	G	T	R	L	D	D	R	I	I	.	.	R	T	D	W	D	A	G	F	K	E	G	R	Q
Template Known Secondary structure			T	T											.	G	G	G	S											T	T	T												S	S											T	T	T	S			T	T				.	.						S				T	T
Template Predicted Secondary structure															.																																																				.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.
		143
Predicted Secondary structure
Query SS confidence
Query Sequence		Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y
Template Known Secondary structure		.
Template Predicted Secondary structure
Template SS confidence
		125

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions