Job Description P0A086 Confidence 28.13% Date Tue Jul 17 17:05:04 BST 2012 Rank 57 Aligned Residues 73 % Identity 5% Template c3pgwS_ PDB info PDB header:splicing/dna/rna Chain: S: PDB Molecule:u1-70k; PDBTitle: crystal structure of human u1 snrnp Resolution 4.40 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	V	T	S	F	E	N	I	L	D	I	Y	F	K	T	F	D	P	T	D	D	Q	G	Q	F	F	D	R	G	E	S	Y	Q	P	V	I	F	Y	H	D	E	H	Q	K	K	A	A	E	F	K	K	Q	Q	L	N	E	Q	G	I	F	K	K	P	V	I	T	P	I	K	P	Y	K	N
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		N	Y	D	T	T	E	S	K	L	R	R	E	F	E	V	Y	G	P	I	K	R	I	H	M	V	Y	S	K	R	S	G	K	P	R	.	G	Y	A	F	I	E	Y	E	H	E	R	D	M	H	S	A	Y	K	H	A	D	G	K	K	I	D	G	R	R	V	L	V	D	V	E	R	G	R	T
Template Known Secondary structure			S	S														S		B									S	S		S	S			.							B	S	S												S	S				T	T									S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions