Job Description P0A086 Confidence 10.78% Date Tue Jul 17 17:05:04 BST 2012 Rank 96 Aligned Residues 69 % Identity 7% Template c3cw18_ PDB info PDB header:splicing Chain: 8: PDB Molecule:u1 small nuclear ribonucleoprotein 70 kda; PDB Fragment:nucleotides 57-82 absent, replaced with kissing loop; PDBTitle: crystal structure of human spliceosomal u1 snrnp Resolution 5.49 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	V	T	S	F	E	N	I	L	D	I	Y	F	K	T	F	D	P	T	D	D	Q	G	Q	F	F	D	R	G	E	S	Y	Q	P	V	I	F	Y	H	D	E	H	Q	K	K	A	A	E	F	K	K	Q	Q	L	N	E	Q	G	I	F	K	K	P	V	I	T	P	I	K
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		N	Y	D	T	T	E	S	K	L	R	R	.	E	F	E	V	Y	G	P	I	K	R	I	H	M	V	Y	S	K	R	S	G	K	P	R	G	Y	A	F	I	E	Y	E	H	E	R	D	M	H	S	A	Y	K	H	A	D	G	K	K	I	D	G	R	R	V	L	V	D	V	E
Template Known Secondary structure			T	T									.				T	T	S											S	S	S		S										S	S												T	T			S	S	S				B
Template Predicted Secondary structure													.
Template SS confidence
		711	.	.	.	.	.	.	.	.	720	.		.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions