Job Description P0A086 Confidence 39.92% Date Tue Jul 17 17:05:04 BST 2012 Rank 49 Aligned Residues 78 % Identity 15% Template c2hgnA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein f; PDBTitle: nmr structure of the third qrrm domain of human hnrnp f Resolution UNK

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	H	V	E	A	V	Q	I	T	F	D	P	E	V	T	S	F	E	N	I	L	D	I	Y	F	K	T	F	D	P	T	D	D	Q	G	Q	F	F	D	R	G	E	S	Y	Q	P	V	I	F	Y	H	D	E	H	Q	K	K	A	A	E	F	K	K	Q	Q	L	N	E	Q	G	I	F	K	K	P	V	I	T	P
Query Conservation
Alig confidence						.	.																		.																																	.	.								.												.	.
Template Conservation						.	.																		.																																	.	.								.												.	.
Template Sequence		T	G	H	C	.	.	V	H	M	R	G	L	P	Y	K	A	T	E	N	D	I	Y	N	.	F	F	S	P	L	N	P	V	R	V	H	I	E	I	G	P	D	G	R	V	T	G	E	A	D	V	E	F	A	T	H	E	.	.	E	A	V	A	A	M	S	.	K	D	R	A	N	M	Q	H	R	Y	I	.	.	E
Template Known Secondary structure						.	.					S			T	T									.				S				S							S	S	S	S		S	S								S				.	.						T	T	.			S		S	S	S	S				.	.
Template Predicted Secondary structure						.	.																		.																																	.	.								.												.	.
Template SS confidence
		287	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.			.
		131	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	P	Y	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	L	N	S	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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