Job Description P0A086 Confidence 17.76% Date Tue Jul 17 17:05:04 BST 2012 Rank 65 Aligned Residues 84 % Identity 7% Template c2divA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein; PDBTitle: solution structure of the rrm domain of trna selenocysteine2 associated protein Resolution UNK

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	Q	T	G	H	V	E	A	V	Q	I	T	F	D	P	E	V	T	S	F	E	N	I	L	D	I	Y	F	K	T	F	D	P	T	D	D	Q	G	Q	F	F	D	R	G	E	S	Y	Q	P	V	I	F	Y	H	D	E	H	Q	K	K	A	A	E	F	K	K	Q	Q	L	N	E	Q	G	I	F	K	K	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	S	S	G	M	A	A	S	L	W	M	G	D	L	E	P	Y	M	D	E	N	F	I	S	R	A	F	A	T	M	G	E	T	V	M	S	V	K	I	I	R	N	R	L	T	G	I	P	A	G	Y	C	F	V	E	F	A	D	L	A	T	A	E	K	C	L	H	K	I	N	G	K	P	L	P	G	A	T	P
Template Known Secondary structure						S	S	S	S						S			T	T													T	T												S	S	S												S											T	T	T	T	S			S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		128	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions