Job Description P0A086 Confidence 12.64% Date Tue Jul 17 17:05:04 BST 2012 Rank 88 Aligned Residues 81 % Identity 12% Template c2dgwA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable rna-binding protein 19; PDBTitle: solution structure of the second rna recognition motif in2 rna-binding protein 19 Resolution UNK

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	Q	T	G	H	V	E	A	V	Q	I	T	F	D	P	E	V	T	S	F	E	N	I	L	D	I	Y	F	K	T	F	D	P	T	D	D	Q	G	Q	F	F	D	R	G	E	S	Y	Q	P	V	I	F	Y	H	D	E	H	Q	K	K	A	A	E	F	K	K	Q	Q	L	N	E	Q	G	I	F	K	K	P	V
Query Conservation
Alig confidence								.	.																	.																																			.	.								.
Template Conservation								.	.																	.																																			.	.								.
Template Sequence		S	G	T	T	C	H	.	.	T	V	K	L	R	G	A	P	F	N	V	T	E	K	N	V	.	M	E	F	L	A	P	L	K	P	V	A	I	R	I	V	R	N	A	H	G	N	K	T	G	Y	I	F	V	D	F	S	N	E	E	.	.	E	V	K	Q	A	L	K	.	C	N	R	E	Y	M	G	G	R	Y	I
Template Known Secondary structure								.	.									S	S							.					T	T	S			S								T	T	S											S	S			.	.								.	S		S				T	T
Template Predicted Secondary structure								.	.																	.																																			.	.								.
Template SS confidence
		289	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.
		128	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	I	K	P	Y	K	N
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	E	V	F	R	E	K	S
Template Known Secondary structure		.	.						S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				363	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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