Job Description O07325 Confidence 98.59% Date Tue Jul 17 17:05:02 BST 2012 Rank 63 Aligned Residues 245 % Identity 15% Template d2ewsa1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain Fumble-like Resolution 2.05

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	I	D	I	G	S	S	S	V	K	T	I	V	G	E	K	F	H	N	G	I	N	V	I	G	T	G	Q	T	Y	T	S	G	I	K	N	G	L	I	D	D	F	D	I	A	R	Q	A	I	K	D	T	I	K	K	A	S	I	A	S	G	V	D	I	K	E	V	F	L	K	L	P	I	I	G	T	E	V	Y
Query Conservation
Alig confidence																					.	.	.	.	.										.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																					.	.	.	.	.										.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		V	G	I	D	A	G	G	T	L	I	K	I	V	Q	E	Q	D	N	Q	.	.	.	.	.	R	T	F	K	T	E	L	T	K	.	.	.	.	.	.	.	.	N	I	D	Q	V	V	E	W	L	N	Q	.	.	.	.	.	.	.	.	.	.	Q	Q	I	E	K	L	C	L	T	G	G	N	.	.	.	.	.	.
Template Known Secondary structure								S	S									S	S		.	.	.	.	.								G	G	.	.	.	.	.	.	.	.	G										T	.	.	.	.	.	.	.	.	.	.	S			S						S	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.										.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	S	N	E	I	D	F	Y	E	D	T	E	I	N	G	S	H	I	E	K	V	L	E	G	I	R	E	K	N	D	V	Q	E	T	E	V	I	N	V	F	P	I	R	F	I	V	D	K	E	N	E	V	S	D	P	K	E	L	I	A	R	H	S	L	K	V	E	A	G	V	I	A	I	Q	K	S	I	L	I
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		N	M	I	K	C	V	E	A	C	G	V	D	V	L	D	V	Y	S	D	A	Y	N	Y	G	S	I	L	T	A	T	E	.	.	.	.	K	E	L	G	A	C	V	I	D	I	G	E	D	V	T	Q	V	A	F	Y	E	R	G	E	L	V	D	A	D	S	I	E	M	A	G	R	D	I	T	D	D	I	A	Q	G
Query Conservation																																	.	.	.	.
Alig confidence		.	.																														.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	A	G	V	I	A	E	N	I	N	I	P	A	Q	I	F	V	E	F	D	A	A	S	Q	G	L	G	I	L	L	K	E	Q	G	H	D	L	A	D	Y	I	F	A	N	V	G	T	G	T	S	L	H	Y	F	D	G	Q	S	Q	R	R	V	G	G	I	G	T	G	G	G	M	I	Q	G	L	G	Y	L	L
Template Known Secondary structure		.	.						T	T	S	S	S																						T	T				S								S	S	S								S	S									S		S
Template Predicted Secondary structure		.	.
Template SS confidence
				54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		L	N	T	S	Y	E	T	A	E	K	V	K	H	Q	Y	G	H	A	F	Y	D	S	A	S	D	Q	D	I	F	.	.	.	.	T	V	E	Q	V	D	S	D	E	T	V	Q	Y	T	Q	K	D	L	S	D	F	I	E	A	R	V	E	E	I	F	F	E	V	F	D	V	L	Q	D	L	G	L	T	K	V	N	G
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.
Template Conservation
Template Sequence		S	Q	I	T	D	Y	K	Q	L	T	D	M	A	Q	H	G	D	R	N	T	I	D	L	K	V	R	H	I	I	P	G	D	L	T	A	A	N	F	G	H	V	L	H	H	L	D	A	D	F	T	P	S	N	K	L	A	A	V	I	G	V	V	G	E	V	V	T	T	M	A	I	T	V	A	R	E	F	K	T	E
Template Known Secondary structure															T	T				T	T	T				T	T	T				T	T	S				T	T	T	T	G	G	G		T	T	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		319	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure									.																	.
Query SS confidence									.																	.
Query Sequence		G	F	I	V	T	G	G	.	S	A	N	L	L	G	V	K	E	L	L	S	D	M	V	S	.	E	K	V	R	I	H	T	P	S	Q	M	G	I	R	K	P	E	F	S	S	A	I	S	T	I	S
Query Conservation									.																	.
Alig confidence									.																	.										.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		N	I	V	Y	I	G	S	S	F	H	N	N	A	L	L	R	K	V	V	E	D	Y	T	V	L	R	G	C	K	P	Y	Y	V	E	.	.	.	.	.	N	G	A	F	S	G	A	I	G	A	L	Y
Template Known Secondary structure							S	G	G	G	T	T															T	T							T	.	.	.	.	.	T	G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions