 |
| Job Description | O07325 | | Confidence | 40.56% | Date | Tue Jul 17 17:05:02 BST 2012 |
| Rank | 173 | Aligned Residues | 135 |
| % Identity | 13% | Template | d1g99a2 |
| SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| Acetokinase-like
|
| Resolution | 2.50 |
|
 |
|   |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
. | . | . | . | 230 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | E | L | G | A | C | V | I | D | I | G | E | D | V | T | Q | V | A | F | Y | E | R | G | E | L | V | D | A | . |
. |
D | S | I | E | M | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | D | I | T | D | D | I | A | Q | G | L | N | T | S | Y | E | T | A | E | K | V | K | H | Q | Y | G | H | A | F | Y | D | S |
| Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |   | . | . |   |   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |
|
|   |
|
|
|   |
|   |
|
|   |
|
| . |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |
|   |
|
| Template Sequence |   |
E | E | T | K | I | I | T | C | H | L | G | N | G | S | S | I | T | A | V | . |
E | G | G | K | S | V | E | T | S | M | G | F | T | P | L | E | G | L | A | M | G | T | R | C | G | S | I | D | P | A | I | V | P | F | L | M | E | K | E | G | L | T | T | R | E | I | D | T | L | M | N | K | K | S | G | V | L | G | V | S |
| Template Known Secondary structure |   |
G | G |
|  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  | . |  | T | T |  |  |  |  |  | S |
|
| S | S | T | T | S | S | S |
|
| S | S |
|
|
| S |
|
| T | T |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
|   |
|   |   |
265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | |
. | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | S | D | Q | D | I | F | T | V | E | Q | V | D | S | D | E | T | V | Q | Y | T | Q | K | D | L | S | D | F | I | E | A | R | V | E | E | I | F | F | E | V | F | D | V | L | Q | D | L | G | L | T | K | V | N | G | G | F | I | V | T | G | G | S | A | . |
N | L | L | G | V | K | E | L | L | S | D | M | V | S |
| Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
| . |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|
| . | . | . | . | . |   |   |
|   |
|
|   |
|   |
|   |
|   |
|   |
|   |
|
|
|   |   |
|   |
|   |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |
| Template Sequence |   |
G | L | S | N | D | F | R | D | L | D | E | A | A | S | K | G | N | . |
. |
. |
. |
. |
R | K | A | E | L | A | L | E | I | F | A | Y | K | V | K | K | F | I | G | E | Y | S | A | V | L | N | G | . |
. |
. |
A | D | A | V | V | F | T | A | G | I | G | E | N | S | A | S | I | R | K | R | I | L | T | G | L | D |
| Template Known Secondary structure |   |
S | S |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | . | . | . |
| S |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | T | T |
| G |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | |
|
|
. | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|