Job Description O07325 Confidence 96.67% Date Tue Jul 17 17:05:02 BST 2012 Rank 92 Aligned Residues 293 % Identity 13% Template c3p4iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetate kinase; PDBTitle: crystal structure of acetate kinase from mycobacterium avium Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	Y	Y	V	S	I	D	I	G	S	S	S	V	K	T	I	V	G	E	K	F	H	N	G	I	N	V	I	G	T	G	Q	T	Y	T	S	G	I	K	N	G	L	I	D	D	F	D	I	A	R	Q	A	I	K	D	T	I	K	K	A	S	I	A	S	G	V	D	I	K	E	V	F	L	K	L	P	I	I	G
Query Conservation
Alig confidence																																				.	.	.	.																							.	.											.	.	.	.	.	.
Template Conservation																																				.	.	.	.																							.	.											.	.	.	.	.	.
Template Sequence		A	R	R	V	L	V	I	N	S	G	S	S	S	L	K	F	Q	L	V	D	P	E	S	G	V	A	A	S	T	G	I	V	E	R	.	.	.	.	I	E	S	S	P	V	P	D	H	D	A	A	L	R	R	A	F	D	M	L	A	G	.	.	D	G	V	D	L	N	T	A	G	L	.	.	.	.	.	.	V	A
Template Known Secondary structure												S	S									T	T	T												.	.	.	.					S			S															.	.	T	T			T	T	T	T	T		.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.																							.	.											.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.							.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		T	E	V	Y	D	E	S	N	E	I	D	F	Y	E	D	T	E	I	N	G	S	H	I	E	K	V	L	E	G	I	R	E	K	N	D	V	Q	E	T	E	V	I	N	V	F	P	I	R	F	I	V	D	K	E	N	E	V	S	D	P	K	E	L	I	A	R	H	S	L	K	.	.	.	.	V	E	A	G	V	I
Query Conservation																																																																								.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	H	R	V	V	H	G	G	N	T	F	Y	R	P	T	V	L	D	D	A	V	I	A	R	L	H	E	L	S	E	L	A	P	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	P	A	L	L	G	I	E	V	A	R	R	L	L	P	G	I	A	H	V	A
Template Known Secondary structure							S			T	T	T			S													G	G	G	T	T	T		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.														180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		A	I	Q	K	S	I	L	I	N	M	I	K	C	V	E	A	C	G	V	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	V	Y	S	D	A	Y	N	.	.	Y	G	S	I	L	T	A	T	E	K	E	L	G	A	C	V	I	D	I	G	E	D	V	T	Q	V	A	F	Y	E	R	G	E	L	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																							.
Template Conservation																																																																					.
Template Sequence		V	F	D	T	G	F	F	H	D	L	P	P	A	A	A	T	Y	A	I	D	R	E	L	A	D	R	W	Q	I	R	R	Y	G	F	H	G	T	S	H	R	Y	V	S	E	Q	A	A	A	F	L	D	R	P	L	R	G	L	K	Q	I	V	L	H	L	G	N	G	.	C	S	A	S	A	I	A	G	T	R	P	L
Template Known Secondary structure				T	T	G	G	G	T	T									S	S									T		S				S																	T	S		G	G	G									S	S	S	.								T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.
		224	.	.	.												.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.								.	.																																			.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.								.	.																																			.	.
Query Sequence		D	A	D	S	.	.	.	.	.	.	.	.	.	.	.	I	E	M	A	G	R	D	.	.	I	T	D	D	I	A	Q	G	L	N	T	S	Y	E	T	A	E	K	V	K	H	Q	Y	G	H	A	F	Y	D	S	A	S	D	Q	.	.	D	I	F	T	V	E	Q	V	D	S	D	E	T	V	Q	Y	T	Q	K	D
Query Conservation						.	.	.	.	.	.	.	.	.	.	.								.	.																																			.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.								.	.																																			.	.												.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		D	T	S	M	G	L	T	P	L	E	G	L	V	M	G	T	R	S	G	D	I	D	P	S	V	V	S	Y	L	C	H	T	A	G	M	G	V	D	D	V	E	S	M	L	N	H	R	S	G	V	V	G	L	S	G	V	R	D	F	R	R	L	R	E	L	I	E	S	G	D	G	.	.	.	.	.	.	.	.	A
Template Known Secondary structure				S			S	S	T	T	S	S	S			S	S				S			T																								S								S				T									T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.									.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	S	D	F	I	E	A	R	V	E	E	I	F	F	E	V	F	D	V	L	Q	D	L	G	L	T	K	V	N	G	G	F	I	V	T	G	G	S	A	.	N	L	L	G	V	K	E	L	L	S	D	M	V	S
Query Conservation																																									.
Alig confidence																											.	.	.												.
Template Conservation																											.	.	.
Template Sequence		A	Q	L	A	Y	S	V	F	T	H	R	L	R	K	Y	I	G	A	Y	L	A	V	L	G	H	.	.	.	T	D	V	I	S	F	T	A	G	I	G	E	N	D	A	A	V	R	R	D	A	V	S	G	M	E
Template Known Secondary structure																									S	S	.	.	.												T	T										T	T		G
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions