Job Description O07325 Confidence 99.34% Date Tue Jul 17 17:05:02 BST 2012 Rank 38 Aligned Residues 357 % Identity 11% Template c3hz6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:xylulokinase; PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum Resolution 1.65 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	Y	Y	V	S	I	D	I	G	S	S	S	V	K	T	I	V	G	E	K	F	H	N	G	I	N	V	I	G	T	G	Q	T	Y	T	S	G	I	K	N	G	L	I	D	D	F	D	I	A	R	Q	A	I	K	D	T	I	K	K	A	S	I	A	S	G	V	D	I	K	E	V	F	L	K	L	P	I	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	Y	I	A	T	F	D	I	G	T	T	E	V	K	A	A	L	A	D	R	D	G	G	L	H	F	Q	R	S	I	A	L	E	T	Y	G	D	G	N	G	P	V	E	Q	D	A	G	D	W	Y	D	A	V	Q	R	I	A	S	S	W	W	Q	S	G	V	D	A	R	R	V	S	A	I	V	L	S	G	Q	X
Template Known Secondary structure												S	S									T	T	S													B	S	T	T	S	S																						T	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.																											.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130
Predicted Secondary structure																				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		T	E	V	Y	D	E	S	N	E	I	D	F	Y	E	D	T	E	I	.	.	.	.	.	N	G	S	H	I	E	K	V	L	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	K	N	D	V	Q	E	T	E	V	I	N	V	F	.	P	I	R
Query Conservation																				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence																				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		Q	N	F	L	P	L	D	Q	D	H	E	P	L	H	R	A	V	L	Y	S	D	K	R	P	L	K	E	A	E	E	I	N	A	R	H	G	A	D	N	L	W	S	A	L	E	N	P	X	T	A	A	S	I	L	P	K	L	V	F	W	R	A	S	F	P	Q	A	F	G	R	L	R	H	V	V	L	G	A	K	D
Template Known Secondary structure		S		B					T	T	S		B	S	S					T	T																									S	S			S	T	T	S																	T	T							S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		F	I	V	D	K	E	N	E	V	S	D	P	K	E	L	I	A	R	H	S	L	K	V	E	A	G	V	I	A	I	Q	K	S	I	L	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	I	K	C	V	E	A	C	G	V	D	V	L	D	V	Y	S	D	A	Y	.	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		Y	V	V	L	R	L	T	G	R	H	A	T	D	R	T	N	A	S	T	T	G	L	Y	R	P	K	D	D	A	W	H	V	E	L	L	A	D	Y	G	F	S	L	D	L	X	P	R	L	L	E	P	G	E	Q	V	G	G	V	S	A	L	A	A	R	Q	T	G	F	V	S	G	T	P	V	L	C	G	L	G	D
Template Known Secondary structure									S												T	T				T	T	T	T										T	T			G	G	G	S						T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	G	S	I	L	T	A	T	E	K	E	L	G	A	C	V	I	D	I	G	E	D	V	T	Q	V	A	F	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	E	L	V	D	A	D	S	I	E	M	A	G	R	D	I	T	D	D	I	A	Q	G	L	N	T	S	Y	E
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	A	A	T	L	G	V	G	V	L	D	D	E	D	A	Y	L	H	L	G	T	T	G	W	L	A	R	L	T	Q	T	D	P	V	G	D	X	P	V	G	T	I	F	R	L	A	G	I	I	A	G	K	T	L	Q	V	A	P	V	L	N	A	G	N	I	L	Q	W	A	L	T	L	V	G	H	R	P	G	E
Template Known Secondary structure									T	T			S	T	T							S	S	S														S			S	S							S	S	S	T	T									S	S	S								G	G	G	G	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	E	K	V	K	H	Q	Y	G	H	A	F	Y	D	S	A	S	D	Q	D	I	F	T	V	E	Q	V	D	S	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	Q	Y	T	Q	K	D	L	S	D	F	I	E	A	R	V	E	E	I	F	F	E	V	F	D	V	L	Q	D	L	G	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.																					.
Template Conservation																																																										.	.	.																					.
Template Sequence		D	C	A	E	Y	F	H	X	A	A	A	E	V	Q	G	V	T	V	P	D	G	L	L	F	V	P	Y	L	H	A	E	R	C	P	V	E	L	P	A	P	R	G	A	L	L	G	V	T	G	A	T	T	R	A	Q	I	.	.	.	L	L	A	V	L	E	G	A	A	L	S	L	R	W	C	A	E	L	L	G	.
Template Known Secondary structure			S												T	T					T	T							S	S		B		S	S	S		B	S	S										T	T							.	.	.																				T	.
Template Predicted Secondary structure																																																										.	.	.																					.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.				.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	V	N	G	G	F	I	V	T	G	G	S	A	N	L	L	G	V	K	E	L	L	S	D	M	V	S	E	K	V	R	I	H	T	P	S	Q	M	G	I	R	K	P	E	F	S	S	A	I	S	T	I	S	S	S	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		X	E	K	V	G	L	L	K	V	V	G	G	G	A	R	S	E	A	W	L	R	X	I	A	D	N	L	N	V	S	L	L	V	.	.	.	.	.	.	.	K	P	D	A	H	L	H	P	L	R	G	L	A	A	L	A	A
Template Known Secondary structure		G	G	G								S	G	G	G	G													T						.	.	.	.	.	.	.				G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430								.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.