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Job DescriptionO07325
Confidence57.09%DateTue Jul 17 17:05:02 BST 2012
Rank163Aligned Residues198
% Identity13%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190.........200.........210.........220....... ..230.........240...
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Query Sequence  LINMIKCVEACGVDVLDVYSDAYNYGSILTATEKELGACVIDIGEDVTQVAFYERGELVDADS. IEMAGRDITDDIAQGL
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Template Sequence  ATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDPLT. LYVSGGNTQVIAYVSKKYRVFGETLDIAVGNCLDQFARYV
Template Known Secondary structure  TT

SSS
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   87..90.........100.........110.........120..... ....130.........140.........150.........160.....
 
   244.....250.........260.........270.........280... ......290.........300.........310...
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Query Sequence  NTSYETAEKVKHQYGHAFYDSASDQDIFTVEQVDSDETVQ. . . . . . . . . . YTQKDLSDFIEARVEEIFFEVFDVLQDLGL
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Template Sequence  NLPHPGGPYIEELARKGK. . . . . KLVDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALA
Template Known Secondary structure  T

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   166...170.........180... ......190.........200.........210.........220.........230.........240
 
   314.....320.........330.........340. ........350.. .......360........
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Query Sequence  TKVNGGFIVTGGSANLLGVKELLSDMVS. EKVRIHTPSQM. GIRKPEFSSAISTISS
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Template Sequence  HTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMH
Template Known Secondary structure  T
SSGGGG
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   241........250.........260.........270.........280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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