Job Description O07325 Confidence 98.21% Date Tue Jul 17 17:05:02 BST 2012 Rank 68 Aligned Residues 279 % Identity 16% Template c2qm1D_ PDB info PDB header:transferase Chain: D: PDB Molecule:glucokinase; PDBTitle: crystal structure of glucokinase from enterococcus faecalis Resolution 2.02 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	H	Y	Y	V	S	I	D	I	G	S	S	S	V	K	T	I	V	G	E	K	F	H	N	G	I	N	V	I	G	T	G	Q	T	Y	T	S	G	I	K	N	G	L	I	D	D	F	D	I	A	R	Q	A	I	K	D	T	I	K	K	A	S	I	A	S	G	V	D	I	K	E	V	F	L	K	L	P	I	I
Query Conservation
Alig confidence																										.	.	.															.	.	.	.	.
Template Conservation																										.	.	.															.	.	.	.	.
Template Sequence		X	D	K	K	I	I	G	I	D	L	G	G	T	T	I	K	F	A	I	L	T	T	D	G	.	.	.	V	V	Q	Q	K	W	S	I	E	T	N	I	L	E	.	.	.	.	.	D	G	K	H	I	V	P	S	I	I	E	S	I	R	H	R	I	D	L	Y	N	X	K	K	E	D	F	V	G	I	G	X	G	T
Template Known Secondary structure		T	T										S	S									T	T		.	.	.													T	T	.	.	.	.	.	T	T	T	T																T	T			G	G	G
Template Predicted Secondary structure																										.	.	.															.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		G	T	E	V	Y	D	E	S	N	E	I	D	F	Y	E	D	T	E	.	I	N	G	S	H	I	E	K	V	L	E	G	I	R	E	K	N	D	V	Q	E	T	E	V	I	N	V	F	P	I	R	F	I	V	D	K	E	N	E	V	S	D	P	K	E	L	I	A	R	H	S	L	K	V	E	A	G	V	I	A	I
Query Conservation																				.
Alig confidence																				.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	S	V	D	I	E	K	G	T	V	V	G	A	Y	N	L	N	W	T	T	V	Q	P	V	K	E	Q	I	E	S	A	L	G	I	P	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S				T	T	T	T					B	G	G	G	T	B		S		B												S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																		.	.	.																																								.	.	.	.	.	.
Query SS confidence																																		.	.	.																																								.	.	.	.	.	.
Query Sequence		Q	K	S	I	L	I	N	M	I	K	C	V	E	A	C	G	V	D	V	L	D	V	Y	S	D	A	Y	N	Y	G	S	I	.	.	.	L	T	A	T	E	K	E	L	G	A	C	V	I	D	I	G	E	D	V	T	Q	V	A	F	Y	E	R	G	E	L	V	D	A	D	S	I	E	M	A	.	.	.	.	.	.
Query Conservation																																		.	.	.																																								.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																			.																					.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	N	D	A	N	V	A	A	L	G	E	R	W	K	G	A	G	E	N	N	P	D	V	I	F	I	T	L	G	T	G	.	V	G	G	G	I	V	A	A	G	K	L	L	H	G	V	A	G	C	A	G	E	V	G	H	V	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S	T	T	T	T		S	S							S	S	S	.								T	T						S	S	S		T	T		G	G	G	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
																							111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																							232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	D	I	T	D	D	I	A	Q	G	L	N	T	S	Y	E	T	A	E	K	V	K	H	Q	Y	G	H	A	F	Y	D	S	A	S	D	Q	D	I	F	T	V	E	Q	V	D	S	D	E	T	V	Q	Y	T	Q	K	D	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	P	N	G	F	D	C	T	C	G	K	R	G	C	L	E	T	V	S	S	A	T	G	V	V	R	V	A	R	H	L	S	E	E	F	A	G	D	S	E	L	K	Q	A	I	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	D	V	S	S	K	D	V	F
Template Known Secondary structure		S		T	T	S		B		T	T	S		B	S	B	T					S												G	G	G			S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																							.	.	.	220	.	.	.	.	.	.
									291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																								.													.	.	.
Query SS confidence		.	.	.	.	.	.	.																																								.													.	.	.
Query Sequence		.	.	.	.	.	.	.	D	F	I	E	A	R	V	E	E	I	F	F	E	V	F	D	V	L	Q	D	L	G	L	T	K	V	N	G	G	F	I	V	T	G	G	S	A	N	L	.	L	G	V	K	E	L	L	S	D	M	V	S	.	.	.	E	K	V	R	I	H	T	P	S	Q	M	G	I	R	K	P	E	F
Query Conservation		.	.	.	.	.	.	.																																								.													.	.	.
Alig confidence		.	.	.	.	.	.	.																																								.													.	.	.
Template Conservation
Template Sequence		E	F	A	E	K	G	D	H	F	A	L	X	V	V	D	R	V	C	F	Y	L	G	L	A	T	G	N	L	G	N	T	L	N	P	D	S	V	V	I	G	G	G	V	S	A	A	G	E	F	L	R	S	R	V	E	K	Y	F	Q	E	F	T	F	P	Q	V	R	N	S	T	K	I	K	L	A	E	L	G	N	E
Template Known Secondary structure							T																													S						S	S	G	G	G	G	T														T	S						T	T							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	A	I	S	T	I	S	S	S	I	A	F	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	V	I	G	A	A	S	L	A	L	Q	F	S	K
Template Known Secondary structure											G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions