Job Description O07325 Confidence 99.17% Date Tue Jul 17 17:05:02 BST 2012 Rank 47 Aligned Residues 187 % Identity 20% Template c2p9kB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-like protein 2; PDBTitle: crystal structure of bovine arp2/3 complex co-crystallized2 with atp and crosslinked with glutaraldehyde Resolution 2.59 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																					.	.																					.	.	.	.	.	.	.
Query SS confidence																																																					.	.																					.	.	.	.	.	.	.
Query Sequence		E	A	C	G	V	D	V	L	D	V	Y	S	D	A	Y	N	Y	G	S	I	L	T	A	T	E	K	E	L	G	A	C	V	I	D	I	G	E	D	V	T	Q	V	A	F	Y	E	R	G	E	L	V	.	.	D	A	D	S	I	E	M	A	G	R	D	I	T	D	D	I	A	Q	G	L	.	.	.	.	.	.	.
Query Conservation																																																					.	.																					.	.	.	.	.	.	.
Alig confidence																												.	.	.	.																						.	.																					.	.	.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		E	P	P	M	N	P	T	K	N	R	A	I	Q	A	V	L	T	L	Y	A	Q	G	L	L	T	G	.	.	.	.	V	V	V	D	S	G	D	G	V	T	H	I	C	P	V	Y	E	G	F	S	L	P	H	L	T	R	R	L	D	I	A	G	R	D	I	T	R	Y	L	I	K	L	L	L	L	R	G	Y	A	F
Template Known Secondary structure		B		T	T			T	T	T			B									T	T		S	S		.	.	.	.							S	S									T	T				S	T	T					S		S															T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
				244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.										300	.	.	.	.	.
Predicted Secondary structure		.	.																		.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																		.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query Sequence		.	.	N	T	S	Y	E	T	A	E	K	V	K	H	Q	Y	G	H	A	.	.	.	.	.	.	.	F	Y	D	S	A	S	D	Q	D	I	F	T	V	E	Q	V	D	S	D	E	T	V	Q	Y	T	Q	K	D	L	S	D	F	I	E	A	R	V	E	E	.	.	.	.	.	.	.	.	.	I	F	F	E	V	F
Query Conservation		.	.																		.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.																														.										.	.	.	.	.	.	.	.	.
Template Conservation																																																									.
Template Sequence		N	H	S	A	D	F	E	T	V	R	M	I	K	E	K	L	C	Y	V	G	Y	N	I	E	Q	E	Q	K	L	A	L	E	T	T	V	L	V	E	S	Y	T	L	P	D	G	R	I	I	K	V	G	G	E	R	F	.	E	A	P	E	A	L	F	Q	P	H	L	I	N	V	E	G	V	G	V	A	E	L	L	F
Template Known Secondary structure			T	T	T	T																S	S												S	T	T							T	T	S							T				.		T	G	G	G	G	T		G	G	G	G	T			S
Template Predicted Secondary structure																																																									.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		306	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	L	Q	D	L	G	L	T	.	.	.	K	V	N	G	G	F	I	V	T	G	G	S	A	N	L	L	G	V	K	E	L	L	S	D	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	K	V	R	I	H	T	P	S	Q	M	G	I	R	K	P	E	F	S	S	A	I	S	T
Query Conservation											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		N	T	I	Q	A	A	D	I	D	T	R	S	E	F	Y	K	H	I	V	L	S	G	G	S	T	M	Y	P	G	L	P	S	R	L	E	R	E	L	K	Q	L	Y	L	E	R	V	L	K	G	D	V	E	K	L	S	K	F	K	I	R	I	E	D	P	P	.	.	.	.	.	R	R	K	H	M	V	F	L	G	G
Template Known Secondary structure						T	S		T	T	T						T	T					S	G	G	G		S	T	T																	T	S	T	T		T	T	G	G	G	G									T	.	.	.	.	.	T	G	G	G
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.
		366	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	A
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions