Job Description O07325 Confidence 93.36% Date Tue Jul 17 17:05:02 BST 2012 Rank 111 Aligned Residues 291 % Identity 12% Template c1tuuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetate kinase; PDBTitle: acetate kinase crystallized with atpgs Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.															.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	E	H	Y	Y	V	S	I	D	I	G	S	S	S	V	K	T	I	V	G	E	K	F	H	N	G	I	N	V	I	G	T	G	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	S	G	I	K	N	G	L	I	D	D	F	D	I	A	R	Q	A	I	K	D	T	I	K	K	A	S	I	A
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.
Template Sequence		M	K	.	.	.	V	L	V	I	N	A	G	S	S	S	L	K	Y	Q	L	I	D	M	T	N	E	S	A	L	A	V	G	L	C	E	R	I	G	I	D	N	S	I	I	T	Q	K	K	F	D	G	K	K	L	E	K	L	T	D	L	P	T	H	K	D	A	L	E	E	V	V	K	A	L	T	D	D	E	F	G
Template Known Secondary structure				.	.	.								S	S									T	T	T	T											T	T	S	S	S								T	T	S											S													T		T	T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	D	I	K	E	V	F	L	K	L	P	I	I	G	T	E	V	Y	D	E	S	N	E	I	D	F	Y	E	D	T	E	I	N	G	S	H	I	E	K	V	L	E	G	I	R	E	K	N	D	V	Q	E	T	E	V	I	N	V	F	P	I	R	F	I	V	D	K	E	N	E	V	S	D	P	K	E	L	I
Query Conservation
Alig confidence										.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	K	D	M	G	E	I	.	.	.	.	.	.	N	A	V	G	H	R	V	V	H	G	G	E	K	F	T	T	S	A	L	Y	D	E	G	V	E	K	A	I	K	D	C	F	E	L	A	P	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	P	N	M	M
Template Known Secondary structure		S		S	S	G	G	G		.	.	.	.	.	.								S			T	T	T			S															T	G	G	G	S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																							.	.	.	.	.	.
		147	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.														180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		A	R	H	S	L	K	.	.	.	.	V	E	A	G	V	I	A	I	Q	K	S	I	L	I	N	M	I	K	C	V	E	A	C	G	V	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	V	Y	S	D	A	Y	N	.	.	Y	G	S	I	L	T	A	T	E	K	E	L	G	A	C	V	I	D	I
Query Conservation								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence								.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		G	I	S	A	C	A	E	I	M	P	G	T	P	M	V	I	V	F	D	T	A	F	H	Q	T	M	P	P	Y	A	Y	M	Y	A	L	P	Y	D	L	Y	E	K	H	G	V	R	K	Y	G	F	H	G	T	S	H	K	Y	V	A	E	R	A	A	L	M	L	G	K	P	A	E	E	T	K	I	I	T	C	H	L
Template Known Secondary structure											T	T	S							T	T	G	G	G	G	G									S	S																																T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.												.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.
Predicted Secondary structure																				.								.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence																				.								.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		G	E	D	V	T	Q	V	A	F	Y	E	R	G	E	L	V	D	A	.	D	S	I	E	M	A	G	.	.	.	.	.	.	.	.	.	.	.	R	D	I	T	D	D	I	A	Q	G	L	N	T	S	Y	E	T	A	E	K	V	K	H	Q	Y	G	H	A	F	Y	D	S	A	.	S	D	Q	D	I	F	T	V	E
Query Conservation																				.								.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence																				.								.	.	.	.	.	.	.	.	.	.	.																																		.					.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	N	G	S	S	I	T	A	V	E	G	G	K	S	V	E	T	S	M	G	F	T	P	L	E	G	L	A	M	G	T	R	C	G	S	I	D	P	A	I	V	P	F	L	M	E	K	E	G	L	T	T	R	E	I	D	T	L	M	N	K	K	S	G	V	L	G	V	S	G	L	S	N	D	F	.	.	.	.	.
Template Known Secondary structure		S	S	S								T	T						S			S	S	T	T	S	S	S			S	S				S			T	T										T													S								S	S		S			.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.											.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		Q	V	D	S	D	E	T	V	Q	Y	T	Q	K	D	L	S	D	F	.	.	.	.	.	.	.	.	.	.	I	E	A	R	V	E	E	I	F	F	E	V	F	D	V	L	Q	D	L	G	L	T	K	V	N	G	G	F	I	V	T	G	G	S	A	.	N	L	L	G	V	K	E	L	L	S	D	M	V	S
Query Conservation																				.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.																						.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	D	L	D	E	A	A	S	K	G	N	R	K	A	E	L	A	L	E	I	F	A	Y	K	V	K	K	F	I	G	E	Y	S	A	V	L	N	G	.	.	.	A	D	A	V	V	F	T	A	G	I	G	E	N	S	A	S	I	R	K	R	I	L	T	G	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.									T	T																										T	T	S	.	.	.		S																					T	T		G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
													285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions