Return to main results Retrieve Phyre Job Id

Job DescriptionP48860
Confidence5.33%DateTue Jul 17 17:05:10 BST 2012
Rank79Aligned Residues23
% Identity17%Templated1e0ea_
SCOP infoDNA/RNA-binding 3-helical bundle N-terminal Zn binding domain of HIV integrase N-terminal Zn binding domain of HIV integrase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90....
Predicted Secondary structure 





Query SS confidence 






















Query Sequence  KAVKEATGLGLKDAKELVDGAPK
Query Conservation 
 

 

 






 


  
 
Alig confidence 






















Template Conservation    
   
 

   

 

  
  
Template Sequence  KELSHKFGIPNLVARQIVNSCAQ
Template Known Secondary structure  T



Template Predicted Secondary structure 



Template SS confidence 






















   20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions