Job Description P48860 Confidence 100.00% Date Tue Jul 17 17:05:10 BST 2012 Rank 3 Aligned Residues 119 % Identity 35% Template c2ftcF_ PDB info PDB header:ribosome Chain: F: PDB Molecule:39s ribosomal protein l12, mitochondrial; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome Resolution 12.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.															.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		N	H	E	Q	I	I	E	A	I	K	E	M	S	V	L	E	L	N	D	L	V	K	A	I	E	E	E	F	G	V	T	A	A	A	P	V	A	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	G	A	D	A	A	A	E	K	T	E	F	D	V	E	L	T	S	A	G	.	S	S	K
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		K	I	Q	Q	L	V	Q	D	I	A	S	L	T	L	L	E	I	S	D	L	N	E	L	L	K	K	T	L	K	I	Q	D	V	G	L	M	P	M	G	G	M	V	P	G	A	A	P	A	P	T	A	P	E	A	A	E	E	D	V	P	K	Q	K	E	R	T	H	F	T	V	R	L	T	E	A	K	P	V	D	K
Template Known Secondary structure			T	T	T	T	T	T	T	S	S	S			T	T	T	T	T	T	T	T	T	T	T	T		S	S			S	S	S	S	S	S	T	T		T	T	T	T	T	T	T	T	S	T					T	T	T	S							S	T	T	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		68	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		I	K	V	V	K	A	V	K	E	.	A	T	G	L	G	L	K	D	A	K	E	L	V	D	G	A	P	K	V	I	K	E	A	L	P	K	E	E	A	E	K	L	K	E	Q	L	E	E	V	G	A	T	V	E	L
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		V	K	L	I	K	E	I	K	N	Y	V	Q	G	I	N	L	V	Q	A	K	K	L	V	E	S	L	P	Q	E	I	K	A	N	V	A	K	A	E	A	E	K	I	K	A	A	L	E	A	V	G	G	T	V	V	L
Template Known Secondary structure										T	T	S	S											S	S	S	S	S						S	S		T	T									T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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