Job Description P48860 Confidence 13.48% Date Tue Jul 17 17:05:10 BST 2012 Rank 53 Aligned Residues 103 % Identity 19% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																								.	.								.
Query SS confidence																																								.	.								.
Query Sequence		L	N	D	L	V	K	A	I	E	E	E	F	G	V	T	A	A	A	P	V	A	V	A	G	A	A	G	G	A	D	A	A	A	E	K	T	E	F	.	.	D	V	E	L	T	S	A	.	G	S	S	K	I	K	V	V	K	A	V	K	E	A	T	G	L	G	L	K	D	A	K	E	L	V	D	G	A	P	K	V
Query Conservation																																								.	.								.
Alig confidence																																								.	.								.
Template Conservation
Template Sequence		V	P	V	L	K	R	E	L	R	H	I	L	G	L	N	R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	R	I	E	I
Template Known Secondary structure														T	T	T	S										S										S				S	S									S		T	T	T	T	T				T	T						G	G	G					S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	E	A	L	P	K	E	E	A	E	K	L	K	E	Q	L	E	E	V	G	A	T	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	L	T	V	P	R	E	A	A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L
Template Known Secondary structure						S																T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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