Job Description P48860 Confidence 4.44% Date Tue Jul 17 17:05:10 BST 2012 Rank 91 Aligned Residues 13 % Identity 38% Template c1s1iV_ PDB info PDB header:ribosome Chain: V: PDB Molecule:60s ribosomal protein l28; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

109

110

.

.

.

.

.

.

.

.

.

120

.

Predicted Secondary structure

Query SS confidence

Query Sequence

K

E

Q

L

E

E

V

G

A

T

V

E

L

Query Conservation

Alig confidence

Template Conservation

Template Sequence

E

E

K

I

R

A

A

G

G

V

V

E

L

Template Known Secondary structure

T

T

T

T

S

S

S

S

Template Predicted Secondary structure

Template SS confidence

134

.

.

.

.

.

140

.

.

.

.

.

.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions