Phyre 2 alignment of O05204 with d1seza1

Job Description O05204
Confidence 99.72% Date Tue Jul 17 17:05:01 BST 2012

Rank 130 Aligned Residues 296

% Identity 13% Template d1seza1

SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain

Resolution 2.90

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.										.	.	.	.
Query SS confidence																																		.	.										.	.	.	.
Query Sequence	P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	L	R	T	G	I	V	A	D	R	.	.	I	G	G	Q	V	N	D	T	A	.	.	.	.	G	I	E	N	F	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	Q	Y	D	I	D	A	M
Query Conservation																																		.	.										.	.	.	.
Alig confidence																																		.	.										.	.	.	.
Template Conservation
Template Sequence	A	K	R	V	A	V	I	G	A	G	V	S	G	L	A	A	A	Y	K	L	K	I	H	G	L	N	V	T	V	F	E	A	E	G	K	A	G	G	K	L	R	S	V	S	Q	D	G	L	I	W	D	E	G	A	N	T	X	T	E	S	E	G	D	V	T	F	L	I	D	S	L	G	L	R	E	K	Q	Q	F	P
Template Known Secondary structure										S												T	T	S								S	S	S	S	S		S	S							T	T					S	S				B				S										T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
	13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

	279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	T	G	I	R	A	T	D	I	E	K	T	D	E	A	I	K	V	T	L	E	N	G	A	V	L	E	S	K	T	V	I	I	A	T	G	A	G	W	R	K	L	N	I	P	G	E	E	Q	L	I	N	K	G	V	A	F	C	P	H	C	D	G	P	L	F	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence	L	S	Q	N	K	R	Y	I	A	R	N	G	T	P	V	L	.	.	L	P	S	N	P	I	D	L	I	K	S	N	F	L	S	T	G	S	K	L	Q	X	L	L	E	P	I	L	W	S	H	E	S	V	S	G	F	F	Q	R	H	F	G	K	E	V	V	D	Y	L	I	D	P	F	V	A	G	T	C	G	G	D
Template Known Secondary structure	S	S								S	S	S	S				.	.			S	S							S	S	S	S										T									B																T	T										S
Template Predicted Secondary structure																	.	.
Template SS confidence
	93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

											346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380						.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	K	D	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	N	H	V	T	L	F	E	F	A	S	E	L	.	.	.	.	.	K	A	D	N	V	L	Q	D	R	L	R	S	L	S	N	V	D	I	K	T	N	A	K	T	T	E	V	V	G	E
Query Conservation	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation
Template Sequence	P	D	S	L	S	X	H	H	S	F	P	E	L	W	N	L	E	K	R	F	G	S	V	I	L	G	A	I	R	S	K	L	S	K	T	S	A	N	K	K	R	Q	R	G	S	F	S	F	L	G	G	X	Q	T	L	T	D	A	I	C	K	D	L	R	E	D	E	L	R	L	N	S	R	V	L	E	L	S	C	S
Template Known Secondary structure	G	G	G	S	B															T	S										T	T					S			S	T	T		S		B			T	T		T									T	T	S		T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
	181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

	411							.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440														.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	D	.	.	.	.	.	.	H	V	T	G	I	R	Y	E	D	M	N	T	G	E	E	H	L	L	N	L	D	G	I	F	V	Q	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	N	T	S	W	L	N	D	A	V	E	L	N	E	R	G	E	I	V	I	D	R	N	N	N	T	N	V	P	G
Query Conservation		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	C	T	E	D	S	A	I	D	S	W	S	I	I	S	A	S	P	H	K	R	Q	S	E	E	E	S	F	D	A	V	I	X	T	A	P	L	C	D	V	K	S	X	K	I	A	K	R	G	N	P	F	L	L	N	F	I	P	E	V	Y	G	H	N	Y	D	S	V	L	D	A	I	D	K	X	E	K	N	L	P	G
Template Known Secondary structure		S	S	S	S	S	S								B		S	S	S	S		B						S						S							T	S				S	S	S	S	B				T	T	S						T	T															S	T	T
Template Predicted Secondary structure
Template SS confidence
	271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

	472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	F	A	A	G	D	V	T	D	Q	K	N	K	Q	I	I	I	S	M	G	A	G	A	N	A	A	L	N	A	F	D	Y	I
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence	L	F	Y	A	G	N	H	R	G	G	.	.	L	S	V	G	K	A	L	S	S	G	C	N	A	A	D	L	V	I	S	Y	L
Template Known Secondary structure						S	S	S	S		.	.	S	S
Template Predicted Secondary structure											.	.
Template SS confidence
	463	.	.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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