Job Description O05204 Confidence 99.97% Date Tue Jul 17 17:05:01 BST 2012 Rank 80 Aligned Residues 289 % Identity 20% Template c3hyxC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:sulfide-quinone reductase; PDBTitle: 3-d x-ray structure of the sulfide:quinone oxidoreductase from aquifex2 aeolicus in complex with aurachin c Resolution 2.90 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																										.	.										.	.
Query SS confidence																										.	.										.	.
Query Sequence		P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	.	.	L	R	T	G	I	V	A	D	R	.	.	I	G	G	Q	V	N	D	T	A	G	I	E	N	F	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	Q	Y	D	I	D	A	M	T	G
Query Conservation																										.	.										.	.
Alig confidence																										.	.										.	.															.	.	.	.	.
Template Conservation																																																					.	.	.	.	.
Template Sequence		A	K	H	V	V	V	I	G	G	G	V	G	G	I	A	T	A	Y	N	L	R	N	L	M	P	D	L	K	I	T	L	I	S	D	R	P	Y	F	G	F	T	P	A	F	P	H	L	A	M	G	W	.	.	.	.	.	R	K	F	E	D	I	S	V	P	L	A	P	L	L	P	K	F	N	I	E	F	I	N	E
Template Known Secondary structure										S	S															T	T								S	S	S					G	G	G							T		.	.	.	.	.	S		G	G	G	G				S	T	T	T	G	G	G	G	T						S
Template Predicted Secondary structure																																																					.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		I	R	A	T	D	I	E	K	T	D	E	A	I	K	V	T	L	E	N	G	A	V	L	E	S	K	T	V	I	I	A	T	G	A	G	W	R	K	L	N	I	P	G	E	E	Q	L	I	N	K	.	.	.	.	.	G	V	A	F	C	P	H	C	D	G	P	L	F	E	N	K	D	V	A	V	I	G	G	G	N
Query Conservation																																																				.	.	.	.	.
Alig confidence		.											.	.																										.												.	.	.	.	.
Template Conservation		.											.	.																										.
Template Sequence		.	K	A	E	S	I	D	P	D	A	N	.	.	T	V	T	T	Q	S	G	K	K	I	E	Y	D	Y	L	V	I	A	T	G	P	K	L	V	F	.	G	A	E	G	Q	E	E	N	S	T	S	I	C	T	A	E	H	A	L	E	T	Q	K	K	L	Q	E	L	Y	A	N	P	G	P	V	V	I	G	A	I	P
Template Known Secondary structure		.							T	T	T	T	.	.					T	T							S													.		S	B	T						B			S	S																	S										T
Template Predicted Secondary structure		.											.	.																										.
Template SS confidence
			77	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		356	.	.	.	360	.	.	.	.	.	.	.														.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.									.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		S	G	V	E	A	A	I	D	L	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	H	V	T	L	F	E	F	A	S	E	L	K	A	D	.	.	.	.	.	.	.	.	N	V	L	Q	D	R	L	R	S	L	S	N	V	D	I	K	T	N	A	K	T	T	E	V	V	G	E	D	H	V	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		G	V	S	F	G	P	A	Y	E	F	A	L	M	L	H	Y	E	L	K	K	R	G	I	R	Y	K	V	P	M	T	F	I	T	S	E	P	Y	L	G	H	F	G	V	G	G	I	G	A	S	K	R	L	V	E	D	L	F	A	E	R	N	I	D	W	I	A	N	V	A	V	K	A	I	E	P	D	.	.	.	.
Template Known Secondary structure		T																				T	T		G	G	G								S	S	S	S	T	T		T	T	T	T		S	T	T												T	T						S								S	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.			450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																																					.	.																		.																		.	.	.	.	.	.	.	.
Query SS confidence																																					.	.																		.																		.	.	.	.	.	.	.	.
Query Sequence		G	I	R	Y	E	D	M	N	T	G	E	E	H	L	L	N	L	D	G	I	F	V	Q	I	G	L	L	P	N	T	S	W	L	N	D	.	.	A	V	E	L	N	E	R	G	E	I	V	I	D	R	N	N	N	.	T	N	V	P	G	I	F	A	A	G	D	V	T	D	Q	K	N	.	.	.	.	.	.	.	.
Query Conservation																																					.	.																		.																		.	.	.	.	.	.	.	.
Alig confidence							.																														.	.																		.																		.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		K	V	I	Y	E	.	D	L	N	G	N	T	H	E	V	P	A	K	F	T	M	F	M	P	S	F	Q	G	P	E	V	V	A	S	A	G	D	K	V	A	N	P	A	N	K	M	V	I	V	N	R	C	F	Q	N	P	T	Y	K	N	I	F	G	V	G	V	V	T	A	I	P	P	I	E	K	T	P	I	P	T
Template Known Secondary structure							.		T	T	S								S																	S		T	T	T	B		T	T	T			B				T	T	S	B		S	S		T	T					S	T	T	B					S	S			S	S
Template Predicted Secondary structure							.
Template SS confidence
		230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
					484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	Q	I	I	I	S	M	G	A	G	A	N	A	A	L	N	A	F	D	Y	I	I	R	N
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		G	V	P	K	T	G	M	M	I	E	Q	M	A	M	A	V	A	H	N	I	V	N	D	I	R	N	N
Template Known Secondary structure																										T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions