Job Description O05204 Confidence 99.13% Date Tue Jul 17 17:05:01 BST 2012 Rank 216 Aligned Residues 114 % Identity 32% Template c3cgvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:geranylgeranyl reductase related protein; PDBTitle: crystal structure of geranylgeranyl bacteriochlorophyll reductase-like2 fixc homolog (np_393992.1) from thermoplasma acidophilum at 1.60 a3 resolution Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	E	P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	L	R	T	G	I	V	A	D	R	.	.	I	G	G	Q	V	N	D	T	A	G	I	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	X	E	T	Y	D	V	L	V	V	G	G	G	P	G	G	S	T	A	A	R	Y	A	A	K	Y	G	L	K	T	L	X	I	E	K	R	P	E	I	G	S	P	V	R	C	G	E	G	L	S	K	G	I	L	N	E	A	D	I	K	A	D	R	S	F	I	A	N	E	V	K	G	A	R	I	Y	G	P	S	E
Template Known Secondary structure														S													T	T								S	S	S	S	T	T		S			S						T						T	T					T	T	T						S							T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
									251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	F	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	Q	Y	D	I	D	A	M	T	G	I	R	A	T	D	I	E	K	T	D	E	A	I	K	V	T	L	.	.	.	.	E	N	G	A	V	L	E	S	K	T	V	I	I	A	T	G	A	G
Query Conservation		.	.	.	.	.	.	.																																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																.	.	.	.
Template Conservation
Template Sequence		K	R	P	I	I	L	Q	N	E	V	G	Y	V	L	E	R	D	K	F	D	K	H	L	A	A	L	A	A	K	A	G	A	D	V	W	V	K	S	P	A	L	G	V	I	K	E	N	G	K	V	A	G	A	K	I	R	H	N	N	E	I	V	D	V	R	A	K	X	V	I	A	A	D	G	F	E
Template Known Secondary structure		S	S																													T					S	S										T	T										T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions