Return to main results Retrieve Phyre Job Id

Job DescriptionO05204
Confidence100.00%DateTue Jul 17 17:05:01 BST 2012
Rank63Aligned Residues288
% Identity23%Templatec3cgdB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:pyridine nucleotide-disulfide oxidoreductase, class i; PDBTitle: pyridine nucleotide complexes with bacillus anthracis coenzyme a-2 disulfide reductase: a structural analysis of dual nad(p)h3 specificity
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220........ .230....... ..240.........250.........260.........270.........280.
Predicted Secondary structure 






..



..




















Query SS confidence 






















. .








. .











































Query Sequence  YDVLIVGGGPASGSAAIYTARKG. . LRTGIVADR. . IGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDIDAMTGI
Query Conservation   














  


 
..  
 


  .. 

       
             
   
       

 
    
Alig confidence 






















..








..


















..






















Template Conservation 








 


 

  
   
    
 


     

                ..               

      
Template Sequence  MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIAST. . EKLIARNVKTFRDKYGIDAKVRH
Template Known Secondary structure 


S
TT

SSS

SB
GGGTTSSS
G..GGGBSS
TT

SS
Template Predicted Secondary structure 






























..




Template SS confidence 















































































   1........10.........20.........30.........40.........50..... ....60.........70........
 
   282.......290.........300 .........310.........320.........330.........340.. .......350...
Predicted Secondary structure 





...


















.....





Query SS confidence 


















. . .









































. . . . .










Query Sequence  RATDIEKTDEAIKVTLENG. . . AVLESKTVIIATGAGWRKLNIPGEEQLINKGVAFCPHCDGPL. . . . . FENKDVAVIGG
Query Conservation   
  
        
    
...    








       


        
          .....  

 





Alig confidence 


















...









































.....










Template Conservation   
  
      
                                                                    
Template Sequence  EVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGG
Template Known Secondary structure  TTTTTTT


S







BTTTSBT

SSS




Template Predicted Secondary structure 

















































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   354.....360.........370.........380... ......390.........400.........410.........420........
Predicted Secondary structure 











.....












Query SS confidence 





























. . . . .












































Query Sequence  GNSGVEAAIDLAGIVNHVTLFEFASELKAD. . . . . NVLQDRLRSLSNVDIKTNAKTTEVVGEDHVTGIRYEDMNTGEEHL
Query Conservation 
  
 
 
  
   
  



         .....           

 
     
  
 

  
  
       
    
Alig confidence 





























.....






































......
Template Conservation                                            
   

 
     
  
               ......
Template Sequence  GAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGT. . . . . .
Template Known Secondary structure  STT

SSSSSSTTS
TT

S


SSB

SS
......
Template Predicted Secondary structure 
































......
Template SS confidence 















































































   159160.........170.........180.........190.........200.........210.........220.........230..
 
   429430.........440......... 450.........460.........470.........480... ......490........
Predicted Secondary structure 






.






















.........
Query SS confidence 




















.

































. . . . . . . . .














Query Sequence  LNLDGIFVQIGLLPNTSWLND. AVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKN. . . . . . . . . KQIIISMGAGANAAL
Query Conservation 
  
 

 
 
  
    
  .

     
 
 

    

 







    
 .........  

 
   
  

 
Alig confidence 




















.

































.........














Template Conservation     
 

 
 
  

              
 
 

    

   





 
              

  
   
  

 
Template Sequence  YKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGL
Template Known Secondary structure 
S


S
GGGTTS


B
TTS
B


TTSB
SSTT
GGGB
BTTT
S



Template Predicted Secondary structure 





































Template SS confidence 















































































   233......240.........250.........260.........270.........280.........290.........300.........310..
 
   499500.
Predicted Secondary structure 
Query SS confidence 


Query Sequence  NAF
Query Conservation     
Alig confidence 


Template Conservation 

 
Template Sequence  NML
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 


   313..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions