Job Description O05204 Confidence 95.78% Date Tue Jul 17 17:05:01 BST 2012 Rank 378 Aligned Residues 133 % Identity 12% Template c3c7cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine) Resolution 3.10 Å

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	.	G	L	R	T	G	I	V	A	D	R	I	G	G	Q	V	N	D	T	A	G	I	E	N	F	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	Q	Y	D	I	D	A	M	T	G	I	R	A	T	D
Query Conservation																							.
Alig confidence																							.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	C	V	C	G	G	G	N	G	A	H	T	L	S	G	L	A	A	S	R	D	G	V	E	V	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	F	A	D	E	A	E	R	W	T	K	A	L	G	A	D	E	L	T	V	I	V	N	E	K	D	G	T
Template Known Secondary structure									S											T	T	S	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T										T	T	S									T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																				.	.																																																	.
Query SS confidence																				.	.																																																	.
Query Sequence		I	E	K	T	D	E	A	I	K	V	T	L	E	N	G	A	V	L	.	.	E	S	K	T	V	I	I	A	T	G	A	G	W	R	K	L	N	I	P	G	E	E	Q	L	I	N	K	G	V	A	F	C	P	H	C	D	G	P	L	F	E	N	K	D	V	A	V	I	.	G	G	G	N	S	G	V	E	A	A	I
Query Conservation																				.	.																																																	.
Alig confidence																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	E	V	K	S	R	P	K	V	I	T	K	D	P	E	I	A	I	S	G	A	D	V	V	I	L	T	V	P	A	F	A	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	F	Q	A	M	A	P	Y	V	Q	D	S	A	L	I	V	G	L	P	S	Q	A	G	F	E	F	Q	C	R	D
Template Known Secondary structure										S				S							T	T		S						S		G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			T	T						T	T			S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.															.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	G	I	V	N	H	V	T	L	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	G	D	K	A	A	A	V	S	M	M	S
Template Known Secondary structure				G	G	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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