Job Description O05204 Confidence 100.00% Date Tue Jul 17 17:05:01 BST 2012 Rank 73 Aligned Residues 283 % Identity 20% Template c2w0hA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:trypanothione reductase; PDBTitle: x ray structure of leishmania infantum trypanothione2 reductase in complex with antimony and nadph Resolution 3.00 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.																																.	.	.	.
Predicted Secondary structure																										.											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	.	G	L	R	T	G	I	V	A	D	R	.	.	I	G	G	Q	V	N	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	E
Query Conservation																										.											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	Y	D	L	V	V	L	G	A	G	S	G	G	L	E	A	G	W	N	A	A	V	T	H	K	K	K	V	A	V	V	D	V	Q	A	T	H	G	P	P	L	F	A	A	L	G	G	T	C	V	N	V	G	C	V	P	K	K	L	M	V	T	G	A	Q	Y	M	D	L	I	R	E	S	G	G	F	G	W	E
Template Known Secondary structure			S									S													T	S									S		S	S		B	T	T	T	B			T	T						T	S																					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.													.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		N	F	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	I	D	A	M	T	G	I	R	A	T	D	I	E	K	T	D	E	A	I	K	V	T	L	E	N	G	.	.	.	.	.	.	A	V	L	E	S	K	T	V	I	I	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																		.	.	.	.	.	.
Template Conservation																																													.	.	.
Template Sequence		M	D	R	E	S	L	C	P	N	W	K	T	L	I	A	A	K	N	K	V	V	N	S	I	N	E	S	Y	K	S	M	F	A	D	T	E	G	L	S	F	H	M	G	.	.	.	F	G	A	L	Q	D	A	H	T	V	V	V	R	K	S	E	D	P	H	S	D	V	L	E	T	L	D	T	E	Y	I	L	I	A
Template Known Secondary structure					T	T																														S	S	S						S	.	.	.							T	T						S	S	S	S	T	T	S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.				.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																															.	.	.																												.	.	.	.	.
Query SS confidence																																															.	.	.																												.	.	.	.	.
Query Sequence		T	G	A	G	W	R	K	L	N	I	P	G	E	E	Q	L	I	N	K	G	V	A	F	C	P	H	C	D	G	P	L	F	E	N	K	D	V	A	V	I	G	G	G	N	S	.	.	.	G	V	E	A	A	I	D	L	A	G	I	V	N	H	V	T	L	F	E	F	A	S	E	L	K	A	D	.	.	.	.	.
Query Conservation																																															.	.	.																												.	.	.	.	.
Alig confidence																.	.	.	.	.																											.	.	.																												.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		T	G	S	W	P	T	R	L	G	V	P	G	D	E	.	.	.	.	.	F	C	I	T	S	N	E	A	F	Y	L	E	D	A	P	K	R	M	L	C	V	G	G	G	Y	I	A	V	E	F	A	G	I	F	N	G	Y	K	P	C	G	G	Y	V	D	L	C	Y	R	G	D	L	I	L	R	G	F	D	T	E	V
Template Known Secondary structure											S	T	T	G	G	.	.	.	.	.	G	S	B						T	T		S	S			S						S	S	S																T	T								S	S	S	S	S	S	T	T	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.				.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																																						.	.	.
Query SS confidence																													.																																						.	.	.
Query Sequence		N	V	L	Q	D	R	L	R	S	L	S	N	V	D	I	K	T	N	A	K	T	T	E	V	V	G	E	.	D	H	V	T	G	I	R	Y	E	D	M	N	T	G	E	E	H	L	L	N	L	D	G	I	F	V	Q	I	G	L	L	P	N	T	S	W	L	.	.	.	N	D	A	V	E	L	N	E	R	G	E	I
Query Conservation																													.																																						.	.	.
Alig confidence																													.												.	.	.	.	.																						.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		R	K	S	L	T	K	Q	L	G	A	N	G	I	R	V	R	T	N	L	N	P	T	K	I	T	K	N	E	D	G	S	N	H	V	H	F	N	D	G	.	.	.	.	.	T	E	E	D	Y	D	Q	V	M	L	A	I	G	R	V	P	R	S	Q	A	L	Q	L	D	K	A	G	V	R	T	G	K	N	G	A	V
Template Known Secondary structure												T	T						S										T	T	S							T	T	S	.	.	.	.	.						S											S		S	S	S						T			B		G	G	G		B
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.						.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	R	N	N	N	T	N	V	P	G	I	F	A	A	G	D	V	T	D	Q	K	N	K	Q	I	I	I	S	M	G	A	G	A	N	A	A	L	N	A
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		Q	V	D	A	Y	S	K	T	S	V	D	N	I	Y	A	I	G	D	V	T	N	R	V	.	M	L	T	P	V	A	I	N	E	G	A	A	F	V	E	T	V
Template Known Secondary structure					T	T		B		S	S	T	T					G	G	G	T		S	S	.
Template Predicted Secondary structure																									.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions