Job Description O05204 Confidence 100.00% Date Tue Jul 17 17:05:01 BST 2012 Rank 2 Aligned Residues 384 % Identity 20% Template c2v6oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin glutathione reductase; PDBTitle: structure of schistosoma mansoni thioredoxin-glutathione2 reductase (smtgr) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																								.	.		.	.
Query SS confidence																																																								.	.		.	.
Query Sequence		D	Q	I	K	K	L	E	G	S	F	H	F	E	T	F	I	S	L	T	C	Q	K	C	P	D	V	V	Q	A	L	N	L	M	S	V	I	N	P	N	I	T	H	S	M	I	D	G	A	V	F	R	E	E	S	.	.	E	.	.	N	I	M	A	V	P	A	V	F	L	N	G	E	E	F	G	N	G	R	M	T
Query Conservation																																																								.	.		.	.
Alig confidence																																																								.	.		.	.
Template Conservation
Template Sequence		Q	W	L	R	K	T	V	D	S	A	A	V	I	L	F	S	K	T	T	C	P	Y	C	K	K	V	K	D	V	L	A	E	A	K	I	K	H	A	T	I	E	L	D	Q	L	S	N	G	S	A	I	Q	K	C	L	A	S	F	S	K	I	E	T	V	P	Q	M	F	V	R	G	K	F	I	G	D	S	Q	T	V
Template Known Secondary structure												S							S	S														T	T								G	G	G	S	T	T													S			S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.											.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		I	Q	D	I	L	S	K	L	G	S	T	A	D	A	S	E	F	E	N	K	E	P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	L	R	T	G	I	V	A	D	R	.	.	.	.	.	.	.	.	.	.	I	G	G	Q	V	N	D	T	A	G	I	E	N	F	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence																.	.	.																																						.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																.	.	.
Template Sequence		L	K	Y	Y	S	N	D	E	L	A	G	I	V	N	.	.	.	E	S	K	Y	D	Y	D	L	I	V	I	G	G	G	S	G	G	L	A	A	G	K	E	A	A	K	Y	G	A	K	T	A	V	L	D	Y	V	E	P	T	P	I	G	T	T	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M
Template Known Secondary structure							T	T							T	.	.	.			S	S	S									S													T	T													T	T						T	T							S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																							252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.												.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	.	.	.	.	.	.	.	.	.	.	.	Q	Y	D	I	D	A	M	T	G	I	R	A	T	D	I	E	K	T	D	E	A	I	K	V	T	L	E	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																																															.	.	.
Template Sequence		H	Q	A	G	L	L	S	H	A	L	E	D	A	E	H	F	G	W	S	L	D	R	S	K	I	S	H	N	W	S	T	M	V	E	G	V	Q	S	H	I	G	S	L	N	W	G	Y	K	V	A	L	R	D	N	Q	V	T	Y	L	N	A	.	.	.	K	G	R	L	I	S	P	H	E	V	Q	I	T	D	K	N
Template Known Secondary structure																	T	T						T	T																														T	T						S	.	.	.					S	S	S	S							T	T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		G	A	V	.	.	L	E	S	K	T	V	I	I	A	T	G	A	G	W	R	K	L	N	I	P	G	E	E	Q	L	I	N	K	G	V	A	F	C	P	H	C	D	G	P	L	F	E	N	K	D	V	A	V	I	G	G	G	N	S	G	V	E	A	A	I	D	L	A	G	I	V	N	H	V	T	L	F	E	F	A
Query Conservation					.	.
Alig confidence					.	.																											.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		Q	K	V	S	T	I	T	G	N	K	I	I	L	A	T	G	E	R	P	K	Y	P	E	I	P	G	A	V	E	Y	G	.	.	.	.	I	T	S	D	D	L	F	S	L	P	Y	F	P	G	K	T	L	V	I	G	A	S	Y	V	A	L	E	C	A	G	F	L	A	S	L	G	G	D	V	T	V	M	V	R	S
Template Known Secondary structure																								S	S	T	T						.	.	.	.	B						T	T		S	S				S							S													T	T								S	S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		378	.	380	.	.	.					.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410									.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		S	E	L	K	A	D	.	.	.	.	N	V	L	Q	D	R	L	R	S	L	S	N	V	D	I	K	T	N	A	K	T	T	E	V	V	G	E	.	.	.	.	.	.	.	.	D	H	V	T	G	I	R	Y	E	D	M	N	T	G	E	E	H	L	L	N	L	D	G	I	F	V	Q	I	G	L	L	P	N	T	S
Query Conservation								.	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	L	R	G	F	D	Q	Q	M	A	E	K	V	G	D	Y	M	E	N	H	G	V	K	F	A	K	L	C	V	P	D	E	I	K	Q	L	K	V	V	D	T	E	N	N	K	P	G	L	L	L	V	K	G	H	Y	T	D	G	K	K	F	E	E	E	F	E	T	V	I	F	A	V	G	R	E	P	Q	L	S
Template Known Secondary structure			S	S	T	T	S														T	T	T					T	T													B	T	T	T	T	B											T	T	S								S						S						T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		446	.				.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		W	L	.	.	.	N	D	A	V	E	L	N	E	R	G	E	I	V	I	D	R	N	N	N	T	N	V	P	G	I	F	A	A	G	D	V	T	D	Q	K	N	K	Q	I	I	I	S	M	G	A	G	A	N	A	A	L	N	A	F
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		K	V	L	C	E	T	V	G	V	K	L	D	K	N	G	R	V	V	C	T	D	D	E	Q	T	T	V	S	N	V	Y	A	I	G	D	I	N	A	G	K	P	Q	L	T	P	V	A	I	Q	A	G	R	Y	L	A	R	R	L	F
Template Known Secondary structure		T	T	B		T	T	S				B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.