Job Description O05204 Confidence 100.00% Date Tue Jul 17 17:05:01 BST 2012 Rank 60 Aligned Residues 284 % Identity 16% Template c2v3aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin reductase; PDBTitle: crystal structure of rubredoxin reductase from pseudomonas2 aeruginosa. Resolution 2.4 Å

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	L	R	.	.	T	G	I	V	A	D	R	I	G	G	Q	V	N	D	T	A	G	I	E	N	F	I	T	V	K	E	T	T	G	S	E	F	S	S	N	L	A	A	H	I	D	Q	Y	D	I	D	A	M	T	G	I	R	A
Query Conservation																											.	.
Alig confidence																											.	.								.
Template Conservation																																				.
Template Sequence		A	P	L	V	I	I	G	T	G	L	A	G	Y	N	L	A	R	E	W	R	K	L	D	G	E	T	P	L	L	M	I	T	A	D	.	D	G	R	S	Y	S	K	P	M	L	S	T	G	F	S	K	N	K	D	A	D	G	L	A	M	A	E	P	G	A	M	A	E	Q	L	N	A	R	I	L	T	H	T	R	V
Template Known Secondary structure										S												T	T		S	S	S							S	S	.							G	G	G	G	G	G	T	T	T	T	T																		T	T						S
Template Predicted Secondary structure																																				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		T	D	I	E	K	T	D	E	A	I	K	V	T	L	E	N	G	A	V	L	E	S	K	T	V	I	I	A	T	G	A	G	W	R	K	L	N	I	P	G	E	E	Q	.	.	.	L	I	N	K	G	V	A	F	C	P	H	C	D	G	P	L	F	E	N	K	D	V	A	V	I	G	G	G	N	S	G	V	E	A
Query Conservation																																													.	.	.
Alig confidence										.	.	.																																	.	.	.
Template Conservation										.	.	.
Template Sequence		T	G	I	D	P	G	H	Q	.	.	.	R	I	W	I	G	E	E	E	V	R	Y	R	D	L	V	L	A	W	G	A	E	P	I	R	V	P	V	E	G	D	A	Q	D	A	L	Y	P	I	N	D	L	E	D	Y	A	R	F	R	Q	A	A	A	G	K	R	R	V	L	L	L	G	A	G	L	I	G	C	E	F
Template Known Secondary structure						G	G	G	T	.	.	.					T	T						S																B	S	T	T	T	T						S	S												T	T										S
Template Predicted Secondary structure										.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.							.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		A	I	D	L	A	G	I	V	N	H	V	T	L	F	E	F	A	S	E	L	K	A	D	.	.	.	.	.	.	N	V	L	Q	D	R	L	R	S	L	S	N	V	D	I	K	T	N	A	K	T	T	E	V	V	G	E	D	H	V	T	G	I	R	Y	E	D	M	N	T	G	E	E	H	L	L	N	L	D	G	I
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																																							.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		A	N	D	L	S	S	G	G	Y	Q	L	D	V	V	A	P	C	E	Q	V	M	P	G	L	L	H	P	A	A	A	K	A	V	Q	A	G	L	E	G	L	G	V	R	F	H	L	G	P	V	L	A	S	L	K	K	A	G	E	G	L	E	A	H	L	S	D	G	.	.	.	.	.	E	V	I	P	C	D	L	V
Template Known Secondary structure								T	T								S	S	S	S	S	S	T	T	T	S														T	T	T						S										T	T							T	T	S	.	.	.	.	.						S
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.				480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure																	.																															.	.	.
Query SS confidence																	.																															.	.	.
Query Sequence		F	V	Q	I	G	L	L	P	N	T	S	W	L	N	D	.	A	V	E	L	N	E	R	G	E	I	V	I	D	R	N	N	N	T	N	V	P	G	I	F	A	A	G	D	V	T	.	.	.	D	Q	K	N	K	Q	I	I	I	S	M	G	A	G	A	N	A	A	L	N	A
Query Conservation																	.																															.	.	.
Alig confidence																	.						.	.																								.	.	.
Template Conservation																							.	.
Template Sequence		V	S	A	V	G	L	R	P	R	T	E	L	A	F	A	A	G	L	A	V	N	.	.	R	G	I	V	V	D	R	S	L	R	T	S	H	A	N	I	Y	A	L	G	D	C	A	E	V	D	G	L	N	L	L	Y	V	M	P	L	M	A	C	A	R	A	L	A	Q	T	L
Template Known Secondary structure					S												T	T			B	S	.	.	S	S					T	T		B		S	S	T	T					G	G	G				T	T	B				S
Template Predicted Secondary structure																							.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions