 |
| Job Description | O05204 | | Confidence | 93.97% | Date | Tue Jul 17 17:05:01 BST 2012 |
| Rank | 443 | Aligned Residues | 96 |
| % Identity | 17% | Template | c2albA_ |
| PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:protein disulfide-isomerase a3; |
PDBTitle: nmr structure of the n-terminal domain a of the2 glycoprotein chaperone erp57
|
| Resolution | UNK |
|
 |
|   |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | |
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
. | . | . | . | . | . | |
|
170 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . |  |  |  |
|
|
| . | . |
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| Query Sequence |   |
K | Q | S | I | I | D | Q | I | K | K | L | E | . |
G | S | F | H | F | E | T | F | I | S | L | T | C | Q | K | C | P | D | V | V | Q | A | L | N | L | M | S | . |
V | I | N | P | N | I | T | H | S | M | I | D | G | A | V | F | R | E | E | S | E | N | . |
. |
I | M | A | V | P | A | . |
. |
V | F | L | N | G | E | E |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   | . |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |
| . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|
|   | . | . |   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |
| Template Sequence |   |
D | D | N | F | E | S | R | I | S | D | T | G | S | A | G | L | M | L | V | E | F | F | A | P | W | C | G | H | C | K | R | L | A | P | E | Y | E | A | A | A | T | R | L | K | G | I | V | P | L | A | K | V | D | C | T | A | N | T | N | T | C | N | K | Y | G | V | S | G | Y | P | T | L | K | I | F | R | D | G | E | E |
| Template Known Secondary structure |   |
T | T | T |  |  |  |  | G | G | G |
| S | T | T | S |  |  |  |  |  |  |  |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  | T | T |
|
| S | S | S |  |  |  |  |  |  | T | T |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
|   |
|   |   |
|
|
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
. | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
. |
. |
F | G | N | G | R | M | T | I | Q | D | I | L | S | K | L | G | S | T | A | D | A | S |
| Query Conservation |   |
. | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
| Template Sequence |   |
A | G | A | Y | D | G | P | R | T | A | D | G | I | V | S | H | L | K | K | Q | A | G | P | A |
| Template Known Secondary structure |   |
|
|
|
|
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|