Job Description O05204 Confidence 94.10% Date Tue Jul 17 17:05:01 BST 2012 Rank 440 Aligned Residues 139 % Identity 12% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure															.											.	.	.	.	.
Query SS confidence															.											.	.	.	.	.
Query Sequence		A	G	I	P	L	G	H	E	F	N	S	L	V	.	L	A	I	L	Q	V	S	G	R	A	.	.	.	.	.	P	K	E	K	Q	S	I	I	D	Q	I	K	K	L	E	G	S	F	H	F	E	T	F	I	S	L	T	C	Q	K	C	P	D	V	V	Q	A	L	N	L	M	S	V	I	N	P	N	I	T	H	S
Query Conservation															.											.	.	.	.	.
Alig confidence															.											.	.	.	.	.																					.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	G	N	P	I	A	Q	S	K	S	P	L	I	Q	N	K	L	A	A	Q	T	H	Q	T	M	E	Y	I	A	K	L	G	D	L	D	A	F	E	Q	Q	L	L	A	F	F	E	E	G	A	.	K	G	C	N	I	T	S	P	F	K	E	R	A	Y	Q	L	A	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		T	T														T	T												T	T	T											T	T		.							T	T							T	T		S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	D	G	A	V	F	R	E	E	S	E	N	I	M	A	V	P	A	V	F	L	N	G	E	E	F	G	N	G	R	M	T	I	Q	D	I	L	S	K	L	G	S	T	A	D	A	S	E	F	E	N	K	E	P	Y	D	V	L	I	V	G	G	G	P	A	S	G	S	A	A	I	Y	T	A	R	K	G	L	R
Query Conservation
Alig confidence		.	.	.	.	.																																																	.	.	.	.
Template Conservation		.	.	.	.	.																																																	.	.	.	.
Template Sequence		.	.	.	.	.	E	Y	S	Q	R	A	K	L	A	E	A	C	N	T	L	K	K	L	D	D	G	K	L	Y	A	D	N	T	D	G	I	G	L	V	T	D	L	Q	R	L	N	W	L	R	P	N	Q	H	.	.	.	.	V	L	I	L	G	A	G	G	A	T	K	G	V	L	L	P	L	L	Q	A	Q	Q	N
Template Known Secondary structure		.	.	.	.	.										T			S						S	S	S																			T	T				T	T			.	.	.	.						S	S	T	T	T	T	T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.																																																	.	.	.	.
Template SS confidence
							74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		231	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	I	V	A	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	L	A	N	R	T
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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